{
"report_data_sources": {
"FastQC": {
"all_sections": {
"CHILD11_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD11_R1_fastqc.zip",
"CHILD12_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD12_R1_fastqc.zip",
"CHILD13_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD13_R1_fastqc.zip",
"CHILD14_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD14_R1_fastqc.zip",
"CHILD15_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD15_R1_fastqc.zip",
"CHILD21_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD21_R1_fastqc.zip",
"CHILD22_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD22_R1_fastqc.zip",
"CHILD23_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD23_R1_fastqc.zip",
"CHILD24_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD24_R1_fastqc.zip",
"CHILD25_R1": "/data/MicrobiomaAraraquara/Children/output/fastqc/pre/CHILD25_R1_fastqc.zip"
}
}
},
"report_general_stats_data": [
{
"CHILD11_R1": {
"total_sequences": 19252.0,
"percent_gc": 54.0,
"avg_sequence_length": 300.7987222106794,
"median_sequence_length": 301,
"percent_duplicates": 70.68875960939124,
"percent_fails": 54.54545454545454
},
"CHILD12_R1": {
"total_sequences": 21399.0,
"percent_gc": 54.0,
"avg_sequence_length": 300.92546380671996,
"median_sequence_length": 301,
"percent_duplicates": 69.9051357540072,
"percent_fails": 54.54545454545454
},
"CHILD13_R1": {
"total_sequences": 8231.0,
"percent_gc": 52.0,
"avg_sequence_length": 300.6538695176771,
"median_sequence_length": 301,
"percent_duplicates": 64.71874620337748,
"percent_fails": 45.45454545454545
},
"CHILD14_R1": {
"total_sequences": 21549.0,
"percent_gc": 55.0,
"avg_sequence_length": 300.442340711866,
"median_sequence_length": 301,
"percent_duplicates": 68.72708710380992,
"percent_fails": 54.54545454545454
},
"CHILD15_R1": {
"total_sequences": 16216.0,
"percent_gc": 53.0,
"avg_sequence_length": 300.6809324124322,
"median_sequence_length": 301,
"percent_duplicates": 69.88776517020227,
"percent_fails": 54.54545454545454
},
"CHILD21_R1": {
"total_sequences": 38631.0,
"percent_gc": 55.0,
"avg_sequence_length": 300.9464419766509,
"median_sequence_length": 301,
"percent_duplicates": 88.05363568118868,
"percent_fails": 45.45454545454545
},
"CHILD22_R1": {
"total_sequences": 20530.0,
"percent_gc": 55.0,
"avg_sequence_length": 300.984120798831,
"median_sequence_length": 301,
"percent_duplicates": 87.93472966390648,
"percent_fails": 45.45454545454545
},
"CHILD23_R1": {
"total_sequences": 90364.0,
"percent_gc": 52.0,
"avg_sequence_length": 300.9438714532336,
"median_sequence_length": 301,
"percent_duplicates": 92.30556416271966,
"percent_fails": 45.45454545454545
},
"CHILD24_R1": {
"total_sequences": 91535.0,
"percent_gc": 55.0,
"avg_sequence_length": 300.8183536352215,
"median_sequence_length": 301,
"percent_duplicates": 90.46375703282897,
"percent_fails": 45.45454545454545
},
"CHILD25_R1": {
"total_sequences": 103848.0,
"percent_gc": 54.0,
"avg_sequence_length": 300.9070516524151,
"median_sequence_length": 301,
"percent_duplicates": 92.80390570834297,
"percent_fails": 45.45454545454545
}
}
],
"report_general_stats_headers": [
{
"percent_duplicates": {
"title": "Dups",
"description": "% duplicate reads",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "RdYlGn-rev",
"namespace": "FastQC",
"rid": "fastqc-percent_duplicates",
"placement": 1000
},
"percent_gc": {
"title": "GC",
"description": "Average % GC content",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "PuRd",
"format": "{:,.1f}",
"namespace": "FastQC",
"rid": "fastqc-percent_gc",
"placement": 1000
},
"avg_sequence_length": {
"title": "Avg len",
"description": "Average read length",
"min": 0,
"suffix": " bp",
"scale": "RdYlGn",
"format": "{:,.0f}",
"hidden": true,
"namespace": "FastQC",
"rid": "fastqc-avg_sequence_length",
"placement": 1000
},
"median_sequence_length": {
"title": "Median len",
"description": "Median read length",
"min": 0,
"suffix": " bp",
"scale": "RdYlGn",
"format": "{:,.0f}",
"hidden": true,
"namespace": "FastQC",
"rid": "fastqc-median_sequence_length",
"placement": 1000
},
"percent_fails": {
"title": "Failed",
"description": "Percentage of modules failed in FastQC report (includes those not plotted here)",
"max": 100,
"min": 0,
"suffix": "%",
"scale": "Reds",
"format": "{:,.0f}",
"hidden": true,
"namespace": "FastQC",
"rid": "fastqc-percent_fails",
"placement": 1000
},
"total_sequences": {
"title": "Seqs",
"description": "Total sequences (millions)",
"min": 0,
"scale": "Blues",
"suffix": "M",
"modify": null,
"namespace": "FastQC",
"rid": "fastqc-total_sequences",
"placement": 1000
}
}
],
"report_multiqc_command": "/usr/local/bioinfo/anaconda3/bin/multiqc --title Pre-processing reads (R1) --file-list /data/MicrobiomaAraraquara/Children/output/fastqc/pre/R1.txt -o /data/MicrobiomaAraraquara/Children/output/fastqc/pre",
"report_plot_data": {
"fastqc_sequence_counts_plot": {
"id": "fastqc_sequence_counts_plot",
"anchor": "fastqc_sequence_counts_plot",
"plot_type": "bar_graph",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 390,
"hoverlabel": {
"namelength": -1,
"bgcolor": "rgba(255, 255, 255, 0.8)",
"font": {
"color": "black"
}
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": true,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Sequence Counts",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)",
"showgrid": false,
"categoryorder": "trace",
"type": "category"
},
"barmode": "relative",
"bargroupgap": 0,
"bargap": 0.2,
"legend": {
"tracegroupgap": 0,
"traceorder": "normal"
},
"hovermode": "y unified"
},
"datasets": [
{
"plot_id": "fastqc_sequence_counts_plot",
"label": "1",
"uid": "fastqc_sequence_counts_plot",
"dconfig": {
"title": "FastQC: Sequence Counts
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Sequence Counts
10 samples"
},
"xaxis": {
"title": {
"text": "Number of reads"
},
"hoverformat": ",.2f",
"ticksuffix": "",
"autorangeoptions": {
"minallowed": 0,
"maxallowed": 103848.0
}
},
"yaxis": {
"title": null,
"hoverformat": null,
"ticksuffix": ""
},
"showlegend": true
},
"trace_params": {
"hovertemplate": "%{meta}: %{x}",
"orientation": "h",
"marker": {
"line": {
"width": 0
}
},
"textposition": "inside",
"insidetextanchor": "start"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"cats": [
{
"name": "Unique Reads",
"color": "124,181,236",
"data": [
7473.0,
8730.0,
6953.0,
2477.0,
4615.0,
4883.0,
6739.0,
2904.0,
6440.0,
5643.0
],
"data_pct": [
7.196094291657038,
9.537335445458021,
7.694435837280333,
12.065270336093521,
11.946364318811318,
30.11223482979773,
31.272912896190082,
35.28125379662252,
30.094864245992802,
29.311240390608766
]
},
{
"name": "Duplicate Reads",
"color": "67,67,72",
"data": [
96375.0,
82805.0,
83411.0,
18053.0,
34016.0,
11333.0,
14810.0,
5327.0,
14959.0,
13609.0
],
"data_pct": [
92.80390570834297,
90.46266455454199,
92.30556416271966,
87.93472966390648,
88.05363568118868,
69.88776517020227,
68.72708710380992,
64.71874620337748,
69.90513575400719,
70.68875960939123
]
}
],
"samples": [
"CHILD25_R1",
"CHILD24_R1",
"CHILD23_R1",
"CHILD22_R1",
"CHILD21_R1",
"CHILD15_R1",
"CHILD14_R1",
"CHILD13_R1",
"CHILD12_R1",
"CHILD11_R1"
]
}
],
"pconfig": {
"id": "fastqc_sequence_counts_plot",
"title": "FastQC: Sequence Counts",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Number of reads",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": "Number of reads",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"stacking": "relative",
"hide_zero_cats": true,
"sort_samples": true,
"use_legend": true,
"suffix": null,
"lab_format": null
},
"add_log_tab": false,
"add_pct_tab": true,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"xaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_per_base_sequence_quality_plot": {
"id": "fastqc_per_base_sequence_quality_plot",
"anchor": "fastqc_per_base_sequence_quality_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Mean Quality Scores",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"shapes": [
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 28,
"y1": 100
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 20,
"y1": 28
},
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 0,
"y1": 20
},
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 28,
"y1": 100
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 20,
"y1": 28
},
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 0,
"y1": 20
}
],
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_per_base_sequence_quality_plot",
"label": "1",
"uid": "fastqc_per_base_sequence_quality_plot",
"dconfig": {
"title": "FastQC: Mean Quality Scores
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Mean Quality Scores
10 samples"
},
"xaxis": {
"hoverformat": ",.0f",
"ticksuffix": " bp",
"title": {
"text": "Position (bp)"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": "Phred Score"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
},
"range": [
0,
39.074729604807025
]
}
},
"trace_params": {
"hovertemplate": "%{text}
Base %{x}: %{y:.2f}",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
1,
26.285061292333264
],
[
2,
29.08617286515687
],
[
3,
32.22189902347808
],
[
4,
18.15967172241845
],
[
5,
23.785165177643883
],
[
6,
22.987325992104715
],
[
7,
18.130687720756285
],
[
8,
16.491325576563472
],
[
9,
19.476002493247456
],
[
10,
22.750955744857677
],
[
15,
25.230864325784335
],
[
20,
23.71079368377311
],
[
25,
15.071067940993142
],
[
30,
15.442925410346978
],
[
35,
24.40753168501974
],
[
40,
19.532796592561816
],
[
45,
23.79204238520673
],
[
50,
26.45499688344068
],
[
55,
24.97969042177436
],
[
60,
32.79295657594016
],
[
65,
31.157832952420527
],
[
70,
22.080085185954708
],
[
75,
22.547548306669437
],
[
80,
28.963237888576042
],
[
85,
28.015746093810613
],
[
90,
17.913922077922077
],
[
95,
28.62778181818182
],
[
100,
27.031896103896106
],
[
105,
23.11043116883117
],
[
110,
15.94850909090909
],
[
115,
26.956072727272726
],
[
120,
26.073174025974026
],
[
125,
32.21348571428571
],
[
130,
32.09475324675325
],
[
135,
30.16243116883117
],
[
140,
29.188384415584416
],
[
145,
28.186846753246755
],
[
150,
29.037693506493508
],
[
155,
24.034036363636364
],
[
160,
26.465870129870133
],
[
165,
27.42958229426434
],
[
170,
26.16737323358271
],
[
175,
21.040679551122192
],
[
180,
19.780122610141312
],
[
185,
21.49220563181333
],
[
190,
23.452506884189745
],
[
195,
19.152106821842366
],
[
200,
23.699132332311528
],
[
205,
17.540125733880608
],
[
210,
19.106873798514055
],
[
215,
19.375414350288356
],
[
220,
20.100441627266587
],
[
225,
17.37277107054411
],
[
230,
15.295271744778137
],
[
235,
20.73426166476151
],
[
240,
17.296435622986596
],
[
245,
19.2614465343448
],
[
250,
18.366444975579338
],
[
255,
16.607482074197232
],
[
260,
17.209477293983163
],
[
265,
17.630489452353736
],
[
270,
18.49864906993661
],
[
275,
13.694617063285879
],
[
280,
15.9961550452042
],
[
285,
16.590657799023173
],
[
290,
15.284246077106932
],
[
295,
15.665373584354551
],
[
300,
10.924814345381858
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
1,
26.366325529230338
],
[
2,
29.039067246132998
],
[
3,
32.17281181363615
],
[
4,
18.222907612505256
],
[
5,
23.92700593485677
],
[
6,
22.791999626150755
],
[
7,
17.8951820178513
],
[
8,
16.04163745969438
],
[
9,
19.438899013972616
],
[
10,
22.611252862283283
],
[
15,
24.882863685218933
],
[
20,
23.76071779055096
],
[
25,
14.952063180522455
],
[
30,
14.91699612131408
],
[
35,
24.31040702836581
],
[
40,
18.659498107388195
],
[
45,
23.714650217299873
],
[
50,
27.50433197812982
],
[
55,
24.81686994719379
],
[
60,
31.667405018926114
],
[
65,
30.804645076872752
],
[
70,
22.389672414598813
],
[
75,
21.63326323659984
],
[
80,
28.9141361745876
],
[
85,
27.766486202028993
],
[
90,
17.775969716795963
],
[
95,
27.878306383774184
],
[
100,
26.37140854285447
],
[
105,
23.106776334236848
],
[
110,
16.79773810636508
],
[
115,
26.703607813814376
],
[
120,
25.984559304607906
],
[
125,
31.956360407514715
],
[
130,
31.932311430974863
],
[
135,
29.825422936723054
],
[
140,
28.125619216749225
],
[
145,
27.725292083372278
],
[
150,
28.468735395831384
],
[
155,
23.822544163005887
],
[
160,
25.508785867838114
],
[
165,
27.20833652661438
],
[
170,
25.45812573031082
],
[
175,
20.120308483290486
],
[
180,
18.739901846225752
],
[
185,
20.88371114746436
],
[
190,
22.792727272727273
],
[
195,
19.15901846225754
],
[
200,
23.26955745990772
],
[
205,
17.4966532672712
],
[
210,
18.427905020099097
],
[
215,
19.055819388613635
],
[
220,
19.850640366457885
],
[
225,
17.006700628847
],
[
230,
15.340501121914736
],
[
235,
20.385312266267768
],
[
240,
16.904777486910994
],
[
245,
19.253777112939417
],
[
250,
18.107189603590125
],
[
255,
16.346727748691098
],
[
260,
17.297363500373972
],
[
265,
17.596063949139864
],
[
270,
18.551972700074792
],
[
275,
14.039594240837697
],
[
280,
16.26778234854151
],
[
285,
16.78731301421092
],
[
290,
15.613032909498878
],
[
295,
15.783727519273805
],
[
300,
10.536574361378225
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
1,
26.19426558133884
],
[
2,
28.942412829546836
],
[
3,
32.153079820191955
],
[
4,
18.178107155874134
],
[
5,
23.761754343336168
],
[
6,
22.795407605394242
],
[
7,
18.0314664074839
],
[
8,
16.40019438707326
],
[
9,
19.36909245535172
],
[
10,
22.69235815818248
],
[
15,
25.321904993317947
],
[
20,
23.568460697363626
],
[
25,
14.641185761146883
],
[
30,
15.465289758231076
],
[
35,
24.630470173733446
],
[
40,
19.923071315757504
],
[
45,
24.101615842546472
],
[
50,
25.71041185761147
],
[
55,
24.79083950917264
],
[
60,
32.3364354270441
],
[
65,
30.63263272992346
],
[
70,
21.912061369510667
],
[
75,
22.7521992709599
],
[
80,
28.255504252733896
],
[
85,
27.69100357133624
],
[
90,
18.083591720577626
],
[
95,
27.926872568093387
],
[
100,
26.459046692607
],
[
105,
22.744503891050584
],
[
110,
15.337791828793774
],
[
115,
27.33317120622568
],
[
120,
25.592315175097276
],
[
125,
31.639810311284048
],
[
130,
31.39073443579767
],
[
135,
29.598078793774317
],
[
140,
28.796108949416343
],
[
145,
28.157320038910505
],
[
150,
28.971303501945528
],
[
155,
24.72706712062257
],
[
160,
26.664542801556415
],
[
165,
26.7363326848249
],
[
170,
26.324975680933846
],
[
175,
20.92913325937356
],
[
180,
20.107697920466983
],
[
185,
22.130887189147632
],
[
190,
24.781537338846995
],
[
195,
19.779080515689614
],
[
200,
23.890926781804914
],
[
205,
17.463293602529795
],
[
210,
19.340987594259307
],
[
215,
19.090561907078573
],
[
220,
20.447920214059838
],
[
225,
16.826538555096082
],
[
230,
15.225881780588665
],
[
235,
20.52442228168329
],
[
240,
17.18226934324325
],
[
245,
18.470875912408758
],
[
250,
18.446593673965936
],
[
255,
16.99676399026764
],
[
260,
17.06603406326034
],
[
265,
17.67433090024331
],
[
270,
18.202457420924578
],
[
275,
13.162360097323603
],
[
280,
15.933406326034065
],
[
285,
16.76992700729927
],
[
290,
15.46229217565732
],
[
295,
16.04104353544387
],
[
300,
11.294053470284794
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
1,
26.14492551858555
],
[
2,
28.982551394496266
],
[
3,
32.12840503039584
],
[
4,
17.83971413986728
],
[
5,
23.68174857301963
],
[
6,
22.885377511717483
],
[
7,
18.087243027518678
],
[
8,
16.521833959812522
],
[
9,
19.615016938140982
],
[
10,
22.781558308970254
],
[
15,
25.22114251241357
],
[
20,
23.294157501508188
],
[
25,
14.570680774049839
],
[
30,
15.195507912200103
],
[
35,
24.58147477841199
],
[
40,
20.251222794561233
],
[
45,
24.494408093182976
],
[
50,
26.350410691911456
],
[
55,
25.152350457097775
],
[
60,
32.33022414033134
],
[
65,
31.169372128637058
],
[
70,
22.066629541974105
],
[
75,
22.92574133370458
],
[
80,
28.28429618327673
],
[
85,
29.112382124156266
],
[
90,
18.377697307335193
],
[
95,
28.873909006499538
],
[
100,
26.75009285051068
],
[
105,
24.842330547818015
],
[
110,
16.55974930362117
],
[
115,
27.318105849582174
],
[
120,
27.51767873723305
],
[
125,
32.221559888579385
],
[
130,
31.989897864438255
],
[
135,
30.33275766016713
],
[
140,
28.976258124419683
],
[
145,
28.42178272980501
],
[
150,
28.64126276694522
],
[
155,
25.066258124419683
],
[
160,
25.635125348189415
],
[
165,
26.77427112349118
],
[
170,
26.297678521682606
],
[
175,
19.27151081808896
],
[
180,
20.41469031479246
],
[
185,
21.629941940236556
],
[
190,
22.828866362875477
],
[
195,
19.037273319073748
],
[
200,
22.842908955640286
],
[
205,
17.89206733004743
],
[
210,
19.887159977178147
],
[
215,
18.961943734015346
],
[
220,
19.998458627806762
],
[
225,
17.10625552299893
],
[
230,
15.947100134877445
],
[
235,
20.225729035858798
],
[
240,
17.67388493558439
],
[
245,
19.971926887121533
],
[
250,
17.976215059764662
],
[
255,
16.824584903027763
],
[
260,
17.188233105436957
],
[
265,
17.759443746802475
],
[
270,
18.38900516255058
],
[
275,
13.44779312590112
],
[
280,
15.802632435700668
],
[
285,
16.771247848937257
],
[
290,
15.242249197711734
],
[
295,
15.439683556141736
],
[
300,
10.763585835625282
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
1,
26.148371978293042
],
[
2,
28.897508633448446
],
[
3,
32.12123828317711
],
[
4,
17.915453872718302
],
[
5,
23.782868771583622
],
[
6,
22.928095707942774
],
[
7,
18.15416872224963
],
[
8,
16.489084854464725
],
[
9,
19.585717809570795
],
[
10,
22.719437592501233
],
[
15,
25.206586087814504
],
[
20,
23.576948692649232
],
[
25,
14.836507153428713
],
[
30,
15.268907252096696
],
[
35,
24.38056240749877
],
[
40,
20.106882091761218
],
[
45,
24.369955599407994
],
[
50,
26.446867291563887
],
[
55,
25.254440059200785
],
[
60,
32.611531820424275
],
[
65,
30.92783670448939
],
[
70,
21.863833717856913
],
[
75,
22.346848402615024
],
[
80,
28.760008066416255
],
[
85,
28.634328695346163
],
[
90,
18.111475814412636
],
[
95,
28.363746298124386
],
[
100,
27.068595755182628
],
[
105,
24.231046396841066
],
[
110,
15.973729022704836
],
[
115,
28.02100197433366
],
[
120,
26.467777366407507
],
[
125,
32.29764284832778
],
[
130,
31.798395655929898
],
[
135,
30.024262618783165
],
[
140,
29.100283845489326
],
[
145,
28.23479485106575
],
[
150,
28.87824745448936
],
[
155,
23.82446158593027
],
[
160,
26.156914532551678
],
[
165,
26.803437154752277
],
[
170,
26.334925631055977
],
[
175,
21.487255446522248
],
[
180,
19.769153860396223
],
[
185,
22.211429982102082
],
[
190,
23.868197247423318
],
[
195,
18.73929519224835
],
[
200,
23.88305869283466
],
[
205,
17.17614022094674
],
[
210,
18.858404985694744
],
[
215,
19.106888038513762
],
[
220,
20.01670164177262
],
[
225,
17.22918213513027
],
[
230,
15.424019759184933
],
[
235,
20.556912627354123
],
[
240,
17.09710404445817
],
[
245,
19.43139240506329
],
[
250,
18.477925285581968
],
[
255,
16.837468354430378
],
[
260,
17.522247607286197
],
[
265,
18.072108675517136
],
[
270,
18.39554183389935
],
[
275,
13.8000740969435
],
[
280,
16.374671194813214
],
[
285,
17.316109910466196
],
[
290,
15.526582278481012
],
[
295,
16.00986507583885
],
[
300,
11.059852357761768
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
1,
33.338174005332505
],
[
2,
33.77996945458311
],
[
3,
33.67414770521084
],
[
4,
33.7166783153426
],
[
5,
33.8933499003391
],
[
6,
36.418109808185136
],
[
7,
35.60596412207813
],
[
8,
32.057000854236236
],
[
9,
30.050037534622454
],
[
10,
29.19676425668505
],
[
15,
35.58355724677073
],
[
20,
37.00985736843468
],
[
25,
36.99569775568844
],
[
30,
36.7964380937589
],
[
35,
36.83007429266651
],
[
40,
36.55044912117212
],
[
45,
36.94176697470943
],
[
50,
36.56231523905672
],
[
55,
36.17217260749139
],
[
60,
36.632652532939865
],
[
65,
36.028443478035776
],
[
70,
36.436851233465354
],
[
75,
35.513318319484355
],
[
80,
35.514115606637155
],
[
85,
34.829080272320155
],
[
90,
35.320291993476744
],
[
95,
34.748124563174656
],
[
100,
34.679133338510525
],
[
105,
35.308824519168546
],
[
110,
34.50067562320417
],
[
115,
33.969796277600885
],
[
120,
33.93825166317207
],
[
125,
33.31155807512102
],
[
130,
33.17390696590821
],
[
135,
32.462317827651376
],
[
140,
32.12628717869069
],
[
145,
32.00723253345758
],
[
150,
31.369842872304627
],
[
155,
30.3295954026559
],
[
160,
30.020998679816728
],
[
165,
28.313007688126117
],
[
170,
28.45820196215475
],
[
175,
27.67450493127281
],
[
180,
26.25517330641195
],
[
185,
26.745391007222178
],
[
190,
26.974103699101754
],
[
195,
24.371313194066936
],
[
200,
24.516947529186403
],
[
205,
24.32193833967539
],
[
210,
23.547637907380086
],
[
215,
21.51428645388419
],
[
220,
23.196536460355674
],
[
225,
21.87827392508607
],
[
230,
19.9369832517926
],
[
235,
18.05427765266237
],
[
240,
18.47578369703088
],
[
245,
18.52222826227641
],
[
250,
18.118360901866374
],
[
255,
16.970728171675596
],
[
260,
17.2626232818203
],
[
265,
15.077228132846676
],
[
270,
15.544164013357147
],
[
275,
16.296595998032668
],
[
280,
14.38991483523595
],
[
285,
13.68403613678134
],
[
290,
13.496668478682924
],
[
295,
13.131049219463204
],
[
300,
13.00940003820132
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
1,
33.27652216268875
],
[
2,
33.7690209449586
],
[
3,
33.643789576229906
],
[
4,
33.71729176814418
],
[
5,
33.89220652703361
],
[
6,
36.53906478324404
],
[
7,
35.75893813930833
],
[
8,
32.28684851436922
],
[
9,
30.681393083292743
],
[
10,
29.55909400876766
],
[
15,
35.69223575255724
],
[
20,
37.10870920603993
],
[
25,
37.05047247929859
],
[
30,
36.981773015099854
],
[
35,
36.97684364344861
],
[
40,
36.960701412566976
],
[
45,
37.019454456892355
],
[
50,
36.781217730151
],
[
55,
36.467501217730145
],
[
60,
36.75629810034097
],
[
65,
36.33205065757428
],
[
70,
36.69789576229907
],
[
75,
35.94640038967365
],
[
80,
35.767179736970284
],
[
85,
35.32720896249391
],
[
90,
35.6023185582075
],
[
95,
35.12162688748174
],
[
100,
35.27055041402826
],
[
105,
35.854856307842184
],
[
110,
34.63246955674622
],
[
115,
34.72796882610814
],
[
120,
34.72284461763273
],
[
125,
34.099883097905504
],
[
130,
34.212917681441795
],
[
135,
33.270112031173895
],
[
140,
32.834028251339504
],
[
145,
32.96132489040429
],
[
150,
31.939698002922558
],
[
155,
31.133239162201658
],
[
160,
30.667082318558208
],
[
165,
28.736697515830492
],
[
170,
28.807773989283977
],
[
175,
28.249264490988793
],
[
180,
26.404588407208962
],
[
185,
27.117457379444716
],
[
190,
27.51960058451047
],
[
195,
25.18261081344374
],
[
200,
25.549469069654165
],
[
205,
24.764305893813933
],
[
210,
24.04543594739406
],
[
215,
21.767871407696056
],
[
220,
23.456746225036532
],
[
225,
22.29087189478812
],
[
230,
20.56225036531904
],
[
235,
18.417126156843644
],
[
240,
18.829069654164634
],
[
245,
19.285552849488553
],
[
250,
18.228543594739406
],
[
255,
17.559493424257187
],
[
260,
17.191933755479788
],
[
265,
15.311115440818313
],
[
270,
16.23529469069654
],
[
275,
16.67360935216756
],
[
280,
15.009235265465174
],
[
285,
13.783955187530442
],
[
290,
13.659064783244034
],
[
295,
13.577258589012184
],
[
300,
13.552813129160707
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
1,
33.274954627949185
],
[
2,
33.75399495374264
],
[
3,
33.624230888406885
],
[
4,
33.6895223761675
],
[
5,
33.8929994245496
],
[
6,
36.52086007702182
],
[
7,
35.809625514585456
],
[
8,
32.41709087689788
],
[
9,
30.773150812270373
],
[
10,
29.65673055641627
],
[
15,
35.69486299853925
],
[
20,
37.1830197866407
],
[
25,
37.145374264087465
],
[
30,
37.11757336992608
],
[
35,
37.05121951219512
],
[
40,
37.01161967155062
],
[
45,
37.10339515736355
],
[
50,
37.05600017706166
],
[
55,
36.704488513124694
],
[
60,
36.83367270151831
],
[
65,
36.551186313133556
],
[
70,
36.90457261741401
],
[
75,
35.99220486034261
],
[
80,
36.189544508875215
],
[
85,
35.85909654287106
],
[
90,
36.21921119029702
],
[
95,
35.69893763002966
],
[
100,
35.88421937939888
],
[
105,
36.07509849054934
],
[
110,
35.60180824222035
],
[
115,
35.22033995839051
],
[
120,
35.401378867690674
],
[
125,
34.790834845735034
],
[
130,
34.46046655747864
],
[
135,
34.130308529945545
],
[
140,
34.02464698331194
],
[
145,
33.73147492364215
],
[
150,
33.38924129077951
],
[
155,
32.355562828222375
],
[
160,
32.22965184480202
],
[
165,
31.205168101635643
],
[
170,
31.045789159159824
],
[
175,
30.23120559527235
],
[
180,
29.009902392598654
],
[
185,
29.35527987428344
],
[
190,
29.496206369934264
],
[
195,
26.62759567074655
],
[
200,
26.683566100794582
],
[
205,
26.567307053850065
],
[
210,
26.69901728602731
],
[
215,
23.568291981142515
],
[
220,
26.517729994134633
],
[
225,
24.45140270692002
],
[
230,
22.52155465300296
],
[
235,
19.60423191421078
],
[
240,
20.35686413386306
],
[
245,
19.854125120350595
],
[
250,
20.301893516008015
],
[
255,
18.919527229667665
],
[
260,
18.74233574218966
],
[
265,
17.21907681411228
],
[
270,
16.729445225263113
],
[
275,
17.923292128241165
],
[
280,
15.493493874569783
],
[
285,
15.523440422306084
],
[
290,
15.077469262181694
],
[
295,
14.019037633790948
],
[
300,
14.662020708060993
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
1,
33.21709728519146
],
[
2,
33.72743759217786
],
[
3,
33.58184301087016
],
[
4,
33.65378270606872
],
[
5,
33.88827224558912
],
[
6,
36.542404544709676
],
[
7,
35.74383569126564
],
[
8,
32.43392145081116
],
[
9,
30.72649806085104
],
[
10,
29.598800458840884
],
[
15,
35.62654940733053
],
[
20,
37.14281750150216
],
[
25,
37.05408859998907
],
[
30,
37.055886819249466
],
[
35,
37.03925929972142
],
[
40,
36.93761074998635
],
[
45,
37.104200579013494
],
[
50,
36.98043371387994
],
[
55,
36.60803627027913
],
[
60,
36.80089801715191
],
[
65,
36.36780903479543
],
[
70,
36.735098049926265
],
[
75,
36.25244769760201
],
[
80,
36.07887911727755
],
[
85,
35.75193751024198
],
[
90,
36.04007865843666
],
[
95,
35.44776752062053
],
[
100,
35.30118315398481
],
[
105,
35.67567815589665
],
[
110,
34.92705085486426
],
[
115,
34.37620582290927
],
[
120,
34.34595509914241
],
[
125,
33.54333315125362
],
[
130,
33.838203965696174
],
[
135,
33.42387065057082
],
[
140,
33.07221718468345
],
[
145,
32.8047632053313
],
[
150,
32.50296170863604
],
[
155,
31.10049707762058
],
[
160,
30.698703228273338
],
[
165,
29.89274485169607
],
[
170,
29.69269896760802
],
[
175,
28.552540558256403
],
[
180,
27.403880482875405
],
[
185,
27.870515103512314
],
[
190,
26.683876112962253
],
[
195,
25.284468236193806
],
[
200,
24.689023870650573
],
[
205,
24.94762877587808
],
[
210,
24.847116403561483
],
[
215,
22.486334189107993
],
[
220,
25.06103239198121
],
[
225,
23.702129240181353
],
[
230,
21.844741355765553
],
[
235,
18.782876495329656
],
[
240,
19.26198284809089
],
[
245,
18.36447479106353
],
[
250,
18.417547386245698
],
[
255,
17.264110995793956
],
[
260,
17.138762222100837
],
[
265,
16.6054012126509
],
[
270,
15.932406183427105
],
[
275,
16.066370240891462
],
[
280,
14.573308570492163
],
[
285,
14.397196700715574
],
[
290,
13.8525744250833
],
[
295,
12.83149606871639
],
[
300,
12.624830344520483
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
1,
33.31809953008243
],
[
2,
33.772802557584164
],
[
3,
33.65598759725753
],
[
4,
33.7141880440644
],
[
5,
33.90646907017949
],
[
6,
36.54867691241044
],
[
7,
35.814363300207994
],
[
8,
32.43091826515677
],
[
9,
30.91119713427317
],
[
10,
29.63184461905862
],
[
15,
35.73761073877205
],
[
20,
37.21402819505431
],
[
25,
37.180922116940145
],
[
30,
37.185211077728994
],
[
35,
37.10181392821916
],
[
40,
37.05247527612738
],
[
45,
37.18401301915318
],
[
50,
37.07114312401899
],
[
55,
36.718164222365594
],
[
60,
36.92644948818936
],
[
65,
36.285899448226715
],
[
70,
36.9094783672133
],
[
75,
36.369903800783845
],
[
80,
36.250707290533185
],
[
85,
35.79844771635194
],
[
90,
36.12612400935992
],
[
95,
35.750303812339304
],
[
100,
35.71652142093657
],
[
105,
36.13884464645103
],
[
110,
35.44039018941327
],
[
115,
35.271021791674286
],
[
120,
35.02743266536346
],
[
125,
34.71257715677872
],
[
130,
34.67105645805849
],
[
135,
34.29601432877213
],
[
140,
34.08283917686597
],
[
145,
33.762015272468155
],
[
150,
33.198332161737945
],
[
155,
32.19749053896599
],
[
160,
32.05266208942001
],
[
165,
30.743618977919436
],
[
170,
30.961999865186282
],
[
175,
29.52981405336697
],
[
180,
28.70764490067118
],
[
185,
28.863273854805623
],
[
190,
28.857580864155928
],
[
195,
26.38001868132926
],
[
200,
26.512313307076756
],
[
205,
26.222234633643723
],
[
210,
25.739526418673627
],
[
215,
23.20201642801429
],
[
220,
25.98739876934336
],
[
225,
23.56976706115728
],
[
230,
21.733600392885688
],
[
235,
19.53568230184791
],
[
240,
20.494641154775778
],
[
245,
19.404458482190144
],
[
250,
19.224139358864484
],
[
255,
18.412354714146776
],
[
260,
17.93604052115131
],
[
265,
16.1030920488796
],
[
270,
16.120161391277556
],
[
275,
17.25959151443951
],
[
280,
14.964079848238274
],
[
285,
14.98773387772396
],
[
290,
14.050191146590658
],
[
295,
13.728325217440963
],
[
300,
14.202410541712858
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_per_base_sequence_quality_plot",
"title": "FastQC: Mean Quality Scores",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Position (bp)",
"ylab": "Phred Score",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "Base {point.x}: {point.y:.2f}",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": 0,
"y_decimals": null,
"tt_decimals": null,
"xmin": 0,
"xmax": null,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": [
{
"from_": 28,
"to": 100,
"color": "#c3e6c3"
},
{
"from_": 20,
"to": 28,
"color": "#e6dcc3"
},
{
"from_": 0,
"to": 20,
"color": "#e6c3c3"
}
],
"x_lines": null,
"y_lines": null,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#d9534f",
"CHILD12_R1": "#d9534f",
"CHILD13_R1": "#d9534f",
"CHILD14_R1": "#d9534f",
"CHILD15_R1": "#d9534f",
"CHILD21_R1": "#d9534f",
"CHILD22_R1": "#d9534f",
"CHILD23_R1": "#d9534f",
"CHILD24_R1": "#d9534f",
"CHILD25_R1": "#d9534f"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_per_sequence_quality_scores_plot": {
"id": "fastqc_per_sequence_quality_scores_plot",
"anchor": "fastqc_per_sequence_quality_scores_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Per Sequence Quality Scores",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"shapes": [
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 28,
"x1": 100,
"y0": 0,
"y1": 1,
"yref": "paper"
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 20,
"x1": 28,
"y0": 0,
"y1": 1,
"yref": "paper"
},
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 20,
"y0": 0,
"y1": 1,
"yref": "paper"
},
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 28,
"x1": 100,
"y0": 0,
"y1": 1,
"yref": "paper"
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 20,
"x1": 28,
"y0": 0,
"y1": 1,
"yref": "paper"
},
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 20,
"y0": 0,
"y1": 1,
"yref": "paper"
}
],
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_per_sequence_quality_scores_plot",
"label": "1",
"uid": "fastqc_per_sequence_quality_scores_plot",
"dconfig": {
"title": "FastQC: Per Sequence Quality Scores
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Per Sequence Quality Scores
10 samples"
},
"xaxis": {
"hoverformat": ",.0f",
"ticksuffix": "",
"title": {
"text": "Mean Sequence Quality (Phred Score)"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
},
"range": [
0,
37.0
]
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": "Count"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}
Phred %{x}: %{y} reads",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
11.0,
1.0
],
[
12.0,
36.0
],
[
13.0,
149.0
],
[
14.0,
485.0
],
[
15.0,
1009.0
],
[
16.0,
965.0
],
[
17.0,
815.0
],
[
18.0,
810.0
],
[
19.0,
956.0
],
[
20.0,
1150.0
],
[
21.0,
1494.0
],
[
22.0,
1824.0
],
[
23.0,
1929.0
],
[
24.0,
2043.0
],
[
25.0,
1953.0
],
[
26.0,
1800.0
],
[
27.0,
1188.0
],
[
28.0,
504.0
],
[
29.0,
129.0
],
[
30.0,
12.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
11.0,
4.0
],
[
12.0,
51.0
],
[
13.0,
183.0
],
[
14.0,
544.0
],
[
15.0,
1228.0
],
[
16.0,
1193.0
],
[
17.0,
1055.0
],
[
18.0,
988.0
],
[
19.0,
1139.0
],
[
20.0,
1433.0
],
[
21.0,
1594.0
],
[
22.0,
1926.0
],
[
23.0,
2047.0
],
[
24.0,
2170.0
],
[
25.0,
2156.0
],
[
26.0,
1845.0
],
[
27.0,
1225.0
],
[
28.0,
490.0
],
[
29.0,
122.0
],
[
30.0,
6.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
12.0,
16.0
],
[
13.0,
78.0
],
[
14.0,
246.0
],
[
15.0,
442.0
],
[
16.0,
413.0
],
[
17.0,
371.0
],
[
18.0,
344.0
],
[
19.0,
407.0
],
[
20.0,
505.0
],
[
21.0,
629.0
],
[
22.0,
772.0
],
[
23.0,
801.0
],
[
24.0,
834.0
],
[
25.0,
790.0
],
[
26.0,
729.0
],
[
27.0,
531.0
],
[
28.0,
254.0
],
[
29.0,
64.0
],
[
30.0,
4.0
],
[
31.0,
1.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
11.0,
2.0
],
[
12.0,
33.0
],
[
13.0,
157.0
],
[
14.0,
529.0
],
[
15.0,
1118.0
],
[
16.0,
1244.0
],
[
17.0,
986.0
],
[
18.0,
879.0
],
[
19.0,
1032.0
],
[
20.0,
1254.0
],
[
21.0,
1537.0
],
[
22.0,
1835.0
],
[
23.0,
2098.0
],
[
24.0,
2221.0
],
[
25.0,
2190.0
],
[
26.0,
2024.0
],
[
27.0,
1532.0
],
[
28.0,
722.0
],
[
29.0,
143.0
],
[
30.0,
13.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
11.0,
1.0
],
[
12.0,
27.0
],
[
13.0,
131.0
],
[
14.0,
451.0
],
[
15.0,
820.0
],
[
16.0,
872.0
],
[
17.0,
692.0
],
[
18.0,
626.0
],
[
19.0,
737.0
],
[
20.0,
1006.0
],
[
21.0,
1202.0
],
[
22.0,
1469.0
],
[
23.0,
1591.0
],
[
24.0,
1631.0
],
[
25.0,
1698.0
],
[
26.0,
1482.0
],
[
27.0,
1036.0
],
[
28.0,
568.0
],
[
29.0,
157.0
],
[
30.0,
19.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
13.0,
1.0
],
[
14.0,
3.0
],
[
15.0,
12.0
],
[
16.0,
36.0
],
[
17.0,
78.0
],
[
18.0,
303.0
],
[
19.0,
665.0
],
[
20.0,
1009.0
],
[
21.0,
1310.0
],
[
22.0,
1526.0
],
[
23.0,
1820.0
],
[
24.0,
2011.0
],
[
25.0,
2371.0
],
[
26.0,
2544.0
],
[
27.0,
2915.0
],
[
28.0,
3355.0
],
[
29.0,
3848.0
],
[
30.0,
4140.0
],
[
31.0,
4131.0
],
[
32.0,
3462.0
],
[
33.0,
2113.0
],
[
34.0,
843.0
],
[
35.0,
133.0
],
[
36.0,
2.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
15.0,
2.0
],
[
16.0,
10.0
],
[
17.0,
43.0
],
[
18.0,
86.0
],
[
19.0,
212.0
],
[
20.0,
362.0
],
[
21.0,
542.0
],
[
22.0,
679.0
],
[
23.0,
916.0
],
[
24.0,
963.0
],
[
25.0,
1164.0
],
[
26.0,
1387.0
],
[
27.0,
1650.0
],
[
28.0,
1873.0
],
[
29.0,
2144.0
],
[
30.0,
2272.0
],
[
31.0,
2423.0
],
[
32.0,
1978.0
],
[
33.0,
1293.0
],
[
34.0,
474.0
],
[
35.0,
54.0
],
[
36.0,
3.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
14.0,
1.0
],
[
15.0,
9.0
],
[
16.0,
23.0
],
[
17.0,
69.0
],
[
18.0,
227.0
],
[
19.0,
605.0
],
[
20.0,
1109.0
],
[
21.0,
1593.0
],
[
22.0,
2126.0
],
[
23.0,
2764.0
],
[
24.0,
3300.0
],
[
25.0,
4044.0
],
[
26.0,
4858.0
],
[
27.0,
5954.0
],
[
28.0,
7136.0
],
[
29.0,
8383.0
],
[
30.0,
10230.0
],
[
31.0,
11318.0
],
[
32.0,
11181.0
],
[
33.0,
8838.0
],
[
34.0,
5009.0
],
[
35.0,
1495.0
],
[
36.0,
91.0
],
[
37.0,
1.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
14.0,
1.0
],
[
15.0,
12.0
],
[
16.0,
28.0
],
[
17.0,
143.0
],
[
18.0,
372.0
],
[
19.0,
907.0
],
[
20.0,
1583.0
],
[
21.0,
2332.0
],
[
22.0,
2930.0
],
[
23.0,
3639.0
],
[
24.0,
4249.0
],
[
25.0,
5123.0
],
[
26.0,
6036.0
],
[
27.0,
6941.0
],
[
28.0,
7973.0
],
[
29.0,
9259.0
],
[
30.0,
10407.0
],
[
31.0,
10813.0
],
[
32.0,
9439.0
],
[
33.0,
6258.0
],
[
34.0,
2592.0
],
[
35.0,
484.0
],
[
36.0,
14.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
14.0,
1.0
],
[
15.0,
10.0
],
[
16.0,
20.0
],
[
17.0,
86.0
],
[
18.0,
285.0
],
[
19.0,
662.0
],
[
20.0,
1376.0
],
[
21.0,
1850.0
],
[
22.0,
2561.0
],
[
23.0,
3368.0
],
[
24.0,
4039.0
],
[
25.0,
4872.0
],
[
26.0,
5895.0
],
[
27.0,
7082.0
],
[
28.0,
8678.0
],
[
29.0,
10601.0
],
[
30.0,
12324.0
],
[
31.0,
13850.0
],
[
32.0,
12631.0
],
[
33.0,
8923.0
],
[
34.0,
3908.0
],
[
35.0,
787.0
],
[
36.0,
39.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_per_sequence_quality_scores_plot",
"title": "FastQC: Per Sequence Quality Scores",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Mean Sequence Quality (Phred Score)",
"ylab": "Count",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "Phred {point.x}: {point.y} reads",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": 0,
"y_decimals": null,
"tt_decimals": null,
"xmin": 0,
"xmax": null,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": [
{
"from_": 28,
"to": 100,
"color": "#c3e6c3"
},
{
"from_": 20,
"to": 28,
"color": "#e6dcc3"
},
{
"from_": 0,
"to": 20,
"color": "#e6c3c3"
}
],
"y_bands": null,
"x_lines": null,
"y_lines": null,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#f0ad4e",
"CHILD12_R1": "#f0ad4e",
"CHILD13_R1": "#f0ad4e",
"CHILD14_R1": "#f0ad4e",
"CHILD15_R1": "#f0ad4e",
"CHILD21_R1": "#5cb85c",
"CHILD22_R1": "#5cb85c",
"CHILD23_R1": "#5cb85c",
"CHILD24_R1": "#5cb85c",
"CHILD25_R1": "#5cb85c"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_per_sequence_gc_content_plot": {
"id": "fastqc_per_sequence_gc_content_plot",
"anchor": "fastqc_per_sequence_gc_content_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Per Sequence GC Content",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_per_sequence_gc_content_plot",
"label": "Percentages",
"uid": "fastqc_per_sequence_gc_content_plot_Percentages",
"dconfig": {
"name": "Percentages",
"ylab": "Percentage",
"tt_suffix": "%",
"title": "FastQC: Per Sequence GC Content
Percentages, 10 samples"
},
"layout": {
"title": {
"text": "FastQC: Per Sequence GC Content
Percentages, 10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "%",
"title": {
"text": "% GC"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 100
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "%",
"title": {
"text": "Percentage"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}
%{x} GC: %{y}",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.0
],
[
43.0,
0.0
],
[
44.0,
0.022756868149234485
],
[
45.0,
0.08849893169146746
],
[
46.0,
0.6093783582183901
],
[
47.0,
2.08351770610769
],
[
48.0,
3.183432999987359
],
[
49.0,
5.302350278771627
],
[
50.0,
6.918087917367257
],
[
51.0,
8.86885722593777
],
[
52.0,
11.053516568264307
],
[
53.0,
11.20270048168705
],
[
54.0,
12.522598834342649
],
[
55.0,
10.418852800991193
],
[
56.0,
5.0558175404882615
],
[
57.0,
3.250439333982326
],
[
58.0,
2.9002364185746625
],
[
59.0,
3.1846972704400933
],
[
60.0,
2.654967950744024
],
[
61.0,
2.1479954991971884
],
[
62.0,
1.8256065337496998
],
[
63.0,
1.5664310909389738
],
[
64.0,
1.1302577847453128
],
[
65.0,
0.9747525190588772
],
[
66.0,
1.0999152938796668
],
[
67.0,
1.1075009165960783
],
[
68.0,
0.3830739471787805
],
[
69.0,
0.16309088840284713
],
[
70.0,
0.09102747259693794
],
[
71.0,
0.09482028395514369
],
[
72.0,
0.06068498173129196
],
[
73.0,
0.03413530222385173
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.003463723271602086
],
[
36.0,
0.003463723271602086
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.003463723271602086
],
[
41.0,
0.0
],
[
42.0,
0.006927446543204172
],
[
43.0,
0.003463723271602086
],
[
44.0,
0.0242460629012146
],
[
45.0,
0.11430286796286883
],
[
46.0,
0.6107698702258344
],
[
47.0,
2.160208747055834
],
[
48.0,
3.3759756153881675
],
[
49.0,
2.9984297787835423
],
[
50.0,
3.569944118597886
],
[
51.0,
6.942456010714445
],
[
52.0,
12.141504641389188
],
[
53.0,
14.629612524823354
],
[
54.0,
14.814344432642127
],
[
55.0,
11.601163811019259
],
[
56.0,
5.6654966979171455
],
[
57.0,
3.155451900429501
],
[
58.0,
2.6809218122200154
],
[
59.0,
2.6843855354916166
],
[
60.0,
2.3576409735371535
],
[
61.0,
1.9650856694222503
],
[
62.0,
1.9858680090518628
],
[
63.0,
1.7180067427146346
],
[
64.0,
1.4409088809864679
],
[
65.0,
1.1049277236410655
],
[
66.0,
0.8797857109869298
],
[
67.0,
0.7620191197524588
],
[
68.0,
0.27363413845656476
],
[
69.0,
0.121230314506073
],
[
70.0,
0.08659308179005215
],
[
71.0,
0.055419572345633376
],
[
72.0,
0.03810095598762295
],
[
73.0,
0.020782339629612515
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.0
],
[
43.0,
0.026807255830578133
],
[
44.0,
0.044678759717630225
],
[
45.0,
0.3246656539481129
],
[
46.0,
2.0045870193310096
],
[
47.0,
7.029458195573822
],
[
48.0,
7.318380841747836
],
[
49.0,
7.428588449051325
],
[
50.0,
8.655765049295571
],
[
51.0,
10.296964822923183
],
[
52.0,
11.044589402198193
],
[
53.0,
10.034849432579747
],
[
54.0,
10.734816668155954
],
[
55.0,
8.5425788580109
],
[
56.0,
4.1789533255890134
],
[
57.0,
2.2369165698626863
],
[
58.0,
1.62630685372174
],
[
59.0,
1.5458850862300058
],
[
60.0,
1.4922705745688496
],
[
61.0,
1.7335358770440525
],
[
62.0,
1.367170047359485
],
[
63.0,
1.0276114735054953
],
[
64.0,
0.6433741399338752
],
[
65.0,
0.33955857385398974
],
[
66.0,
0.20552229470109903
],
[
67.0,
0.06255026360468231
],
[
68.0,
0.03574300777410418
],
[
69.0,
0.0
],
[
70.0,
0.0
],
[
71.0,
0.01787150388705209
],
[
72.0,
0.0
],
[
73.0,
0.0
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.004450378282153982
],
[
43.0,
0.0033377837116154866
],
[
44.0,
0.013351134846461946
],
[
45.0,
0.04450378282153982
],
[
46.0,
0.35603026257231857
],
[
47.0,
1.3651535380507338
],
[
48.0,
1.7067200712060513
],
[
49.0,
2.3342234089897653
],
[
50.0,
5.663106364040931
],
[
51.0,
9.838673787271928
],
[
52.0,
11.39964396973745
],
[
53.0,
9.789719626168232
],
[
54.0,
10.719848687138413
],
[
55.0,
8.835113484646199
],
[
56.0,
4.924343569203379
],
[
57.0,
3.887405429461503
],
[
58.0,
3.4724076546506466
],
[
59.0,
3.6893635959056517
],
[
60.0,
5.023364485981304
],
[
61.0,
5.21695594125498
],
[
62.0,
4.414775255896738
],
[
63.0,
1.6165999109924327
],
[
64.0,
1.296172674677347
],
[
65.0,
1.0436137071651086
],
[
66.0,
1.0536270582999554
],
[
67.0,
0.9657320872274141
],
[
68.0,
0.5607476635514017
],
[
69.0,
0.36381842456608804
],
[
70.0,
0.2036048064085447
],
[
71.0,
0.11014686248331106
],
[
72.0,
0.04339118825100132
],
[
73.0,
0.026702269692923893
],
[
74.0,
0.01001335113484646
],
[
75.0,
0.0033377837116154866
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.00456308464522017
],
[
42.0,
0.00912616929044034
],
[
43.0,
0.0304205643014678
],
[
44.0,
0.08669860825918324
],
[
45.0,
0.7483458818161081
],
[
46.0,
1.5240702715035361
],
[
47.0,
1.6107688797627202
],
[
48.0,
2.9006008061449546
],
[
49.0,
5.303825385960919
],
[
50.0,
9.615940375693945
],
[
51.0,
12.0952163662636
],
[
52.0,
11.392501330899691
],
[
53.0,
10.08745912236672
],
[
54.0,
10.510304966157126
],
[
55.0,
9.771085253631458
],
[
56.0,
6.303140923264127
],
[
57.0,
5.183664156970114
],
[
58.0,
2.7637082667883504
],
[
59.0,
1.9864628488858473
],
[
60.0,
2.1218343600273792
],
[
61.0,
1.8343600273785086
],
[
62.0,
1.2822267853068678
],
[
63.0,
1.040383299110199
],
[
64.0,
0.748345881816108
],
[
65.0,
0.5156285649098792
],
[
66.0,
0.2555327401323295
],
[
67.0,
0.15058179329226562
],
[
68.0,
0.059320100387862215
],
[
69.0,
0.03194159251654119
],
[
70.0,
0.01825233858088068
],
[
71.0,
0.00912616929044034
],
[
72.0,
0.00456308464522017
],
[
73.0,
0.0
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0019249772211028832
],
[
41.0,
0.00577493166330865
],
[
42.0,
0.00577493166330865
],
[
43.0,
0.007699908884411533
],
[
44.0,
0.025024703874337487
],
[
45.0,
0.05967429385418939
],
[
46.0,
0.3054297190816575
],
[
47.0,
1.1119951747237657
],
[
48.0,
1.647780501264069
],
[
49.0,
2.2830229842280207
],
[
50.0,
2.9888479652990734
],
[
51.0,
4.829767847747135
],
[
52.0,
7.895614901890351
],
[
53.0,
8.98579366810826
],
[
54.0,
11.016644636371796
],
[
55.0,
13.483182115678288
],
[
56.0,
13.852777742130042
],
[
57.0,
10.222270703130013
],
[
58.0,
5.98090422596666
],
[
59.0,
3.531049882576389
],
[
60.0,
2.386330095093874
],
[
61.0,
1.7510876121299233
],
[
62.0,
1.1479280828510197
],
[
63.0,
0.8675230676436994
],
[
64.0,
0.7353412984613015
],
[
65.0,
0.5800598026256689
],
[
66.0,
0.49471914582344106
],
[
67.0,
0.644867369069466
],
[
68.0,
1.1049369249130552
],
[
69.0,
1.1126368337974666
],
[
70.0,
0.5697932574464535
],
[
71.0,
0.20789753987911141
],
[
72.0,
0.0692991799597038
],
[
73.0,
0.04234949886426344
],
[
74.0,
0.025024703874337487
],
[
75.0,
0.009624886105514418
],
[
76.0,
0.007699908884411533
],
[
77.0,
0.0019249772211028832
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.003650478821138707
],
[
40.0,
0.003650478821138707
],
[
41.0,
0.003650478821138707
],
[
42.0,
0.003650478821138707
],
[
43.0,
0.007300957642277414
],
[
44.0,
0.007300957642277414
],
[
45.0,
0.018252394105693535
],
[
46.0,
0.06205813995935803
],
[
47.0,
0.2883878268699579
],
[
48.0,
0.710626543848335
],
[
49.0,
0.7982380355556641
],
[
50.0,
1.0805417310570573
],
[
51.0,
3.919397427629259
],
[
52.0,
6.854382399824778
],
[
53.0,
8.267117703605459
],
[
54.0,
12.6562100728879
],
[
55.0,
17.586790133972578
],
[
56.0,
16.717976174541565
],
[
57.0,
10.72388995023181
],
[
58.0,
6.198513038293525
],
[
59.0,
3.600588943916479
],
[
60.0,
2.4324357211520917
],
[
61.0,
1.6256799016804375
],
[
62.0,
1.1693700490380992
],
[
63.0,
0.9235711417480928
],
[
64.0,
0.8408269551356157
],
[
65.0,
0.6570861878049673
],
[
66.0,
0.5001155984960028
],
[
67.0,
0.41615458560981267
],
[
68.0,
0.6424842725204125
],
[
69.0,
0.621798225867293
],
[
70.0,
0.3553132719241675
],
[
71.0,
0.14236867402440959
],
[
72.0,
0.07300957642277414
],
[
73.0,
0.05475718231708061
],
[
74.0,
0.025553351747970954
],
[
75.0,
0.003650478821138707
],
[
76.0,
0.003650478821138707
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.000824998556252527
],
[
38.0,
0.0
],
[
39.0,
0.001649997112505054
],
[
40.0,
0.003299994225010108
],
[
41.0,
0.0041249927812626345
],
[
42.0,
0.009074984118777798
],
[
43.0,
0.018149968237555596
],
[
44.0,
0.04069992877512467
],
[
45.0,
0.21587462221941128
],
[
46.0,
1.3637226134854261
],
[
47.0,
7.070237627084154
],
[
48.0,
9.510583356479136
],
[
49.0,
7.724186482673652
],
[
50.0,
6.997362754615151
],
[
51.0,
7.101312572702989
],
[
52.0,
7.941986101524326
],
[
53.0,
7.271537274809764
],
[
54.0,
8.593184961926328
],
[
55.0,
10.706831263045297
],
[
56.0,
9.706383013829733
],
[
57.0,
6.372013848975768
],
[
58.0,
3.4790189117169064
],
[
59.0,
1.7965718559992534
],
[
60.0,
1.04802316595946
],
[
61.0,
0.7493736885960454
],
[
62.0,
0.676773815645823
],
[
63.0,
0.5263490788891123
],
[
64.0,
0.3423744008447987
],
[
65.0,
0.25079956110076823
],
[
66.0,
0.19387466071934384
],
[
67.0,
0.16004971991299025
],
[
68.0,
0.0643498873876971
],
[
69.0,
0.032999942250101076
],
[
70.0,
0.015674972568798014
],
[
71.0,
0.003299994225010108
],
[
72.0,
0.004949991337515162
],
[
73.0,
0.002474995668757581
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0015989084784786907
],
[
39.0,
0.0007994542392393454
],
[
40.0,
0.0031978169569573814
],
[
41.0,
0.002398362717718036
],
[
42.0,
0.007994542392393453
],
[
43.0,
0.007994542392393453
],
[
44.0,
0.015456115291960674
],
[
45.0,
0.03384356279446562
],
[
46.0,
0.2350395463363675
],
[
47.0,
0.9881254396998308
],
[
48.0,
1.4845865222674635
],
[
49.0,
1.7121644957042623
],
[
50.0,
4.208060630609502
],
[
51.0,
8.517118980109585
],
[
52.0,
9.864732342720743
],
[
53.0,
8.538970729315468
],
[
54.0,
7.743780246018709
],
[
55.0,
8.391871149295408
],
[
56.0,
7.2313300786662875
],
[
57.0,
5.352346131707412
],
[
58.0,
3.885880572196044
],
[
59.0,
3.3526445946234067
],
[
60.0,
4.681870509732014
],
[
61.0,
8.038778860298049
],
[
62.0,
7.707804805252885
],
[
63.0,
3.0365936853774755
],
[
64.0,
1.3420171829364458
],
[
65.0,
0.8002536934785849
],
[
66.0,
0.5332359775726434
],
[
67.0,
0.4716780011512137
],
[
68.0,
0.6022555268936401
],
[
69.0,
0.5636152386637384
],
[
70.0,
0.35175986526531194
],
[
71.0,
0.16628648176178382
],
[
72.0,
0.0687530645745837
],
[
73.0,
0.031178715330334467
],
[
74.0,
0.013590722067068869
],
[
75.0,
0.008793996631632798
],
[
76.0,
0.0015989084784786907
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0007169435263584281
],
[
40.0,
0.0014338870527168563
],
[
41.0,
0.0021508305790752845
],
[
42.0,
0.005735548210867425
],
[
43.0,
0.013143964649904517
],
[
44.0,
0.032023477510676454
],
[
45.0,
0.25666578243631705
],
[
46.0,
0.7102520534457533
],
[
47.0,
0.9016759749834489
],
[
48.0,
1.5669995674440704
],
[
49.0,
3.1875309181895726
],
[
50.0,
6.907033932937093
],
[
51.0,
9.520771048864507
],
[
52.0,
11.461776155892219
],
[
53.0,
10.793345808150693
],
[
54.0,
10.11105455223292
],
[
55.0,
10.605745585420234
],
[
56.0,
10.461400955446734
],
[
57.0,
8.850428851719345
],
[
58.0,
6.186027726595969
],
[
59.0,
3.344541550462067
],
[
60.0,
1.8205585945995018
],
[
61.0,
1.1863025549477457
],
[
62.0,
0.8029767495214396
],
[
63.0,
0.5398584753478963
],
[
64.0,
0.33696345738846123
],
[
65.0,
0.20504584853851043
],
[
66.0,
0.09535348900567095
],
[
67.0,
0.047318272739656254
],
[
68.0,
0.022225249317111274
],
[
69.0,
0.010037209369017995
],
[
70.0,
0.008603322316301138
],
[
71.0,
0.0007169435263584281
],
[
72.0,
0.0007169435263584281
],
[
73.0,
0.0007169435263584281
],
[
74.0,
0.0007169435263584281
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0007169435263584281
],
[
78.0,
0.0007169435263584281
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
},
{
"plot_id": "fastqc_per_sequence_gc_content_plot",
"label": "Counts",
"uid": "fastqc_per_sequence_gc_content_plot_Counts",
"dconfig": {
"name": "Counts",
"ylab": "Count",
"tt_suffix": "",
"title": "FastQC: Per Sequence GC Content
Counts, 10 samples"
},
"layout": {
"title": {
"text": "FastQC: Per Sequence GC Content
Counts, 10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "%",
"title": {
"text": "% GC"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 100
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": "Count"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}
%{x} GC: %{y}",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.0
],
[
43.0,
0.0
],
[
44.0,
1.5
],
[
45.0,
5.833333333333334
],
[
46.0,
40.166666666666664
],
[
47.0,
137.33333333333331
],
[
48.0,
209.83333333333343
],
[
49.0,
349.49999999999943
],
[
50.0,
455.9999999999982
],
[
51.0,
584.5833333333331
],
[
52.0,
728.5833333333348
],
[
53.0,
738.416666666667
],
[
54.0,
825.4166666666671
],
[
55.0,
686.7500000000002
],
[
56.0,
333.24999999999994
],
[
57.0,
214.25000000000003
],
[
58.0,
191.1666666666667
],
[
59.0,
209.9166666666667
],
[
60.0,
175.00000000000003
],
[
61.0,
141.58333333333334
],
[
62.0,
120.33333333333333
],
[
63.0,
103.25
],
[
64.0,
74.5
],
[
65.0,
64.25
],
[
66.0,
72.5
],
[
67.0,
73.0
],
[
68.0,
25.25
],
[
69.0,
10.75
],
[
70.0,
6.0
],
[
71.0,
6.25
],
[
72.0,
4.0
],
[
73.0,
2.25
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.25
],
[
36.0,
0.25
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.25
],
[
41.0,
0.0
],
[
42.0,
0.5
],
[
43.0,
0.25
],
[
44.0,
1.75
],
[
45.0,
8.25
],
[
46.0,
44.08333333333333
],
[
47.0,
155.91666666666666
],
[
48.0,
243.6666666666667
],
[
49.0,
216.4166666666669
],
[
50.0,
257.66666666666686
],
[
51.0,
501.08333333333314
],
[
52.0,
876.3333333333339
],
[
53.0,
1055.9166666666674
],
[
54.0,
1069.2500000000002
],
[
55.0,
837.3333333333336
],
[
56.0,
408.9166666666667
],
[
57.0,
227.75000000000006
],
[
58.0,
193.50000000000006
],
[
59.0,
193.75
],
[
60.0,
170.16666666666669
],
[
61.0,
141.83333333333334
],
[
62.0,
143.33333333333334
],
[
63.0,
124.0
],
[
64.0,
104.0
],
[
65.0,
79.75
],
[
66.0,
63.5
],
[
67.0,
55.0
],
[
68.0,
19.75
],
[
69.0,
8.75
],
[
70.0,
6.25
],
[
71.0,
4.0
],
[
72.0,
2.75
],
[
73.0,
1.5
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.0
],
[
43.0,
0.75
],
[
44.0,
1.25
],
[
45.0,
9.083333333333332
],
[
46.0,
56.083333333333336
],
[
47.0,
196.66666666666666
],
[
48.0,
204.75000000000014
],
[
49.0,
207.8333333333335
],
[
50.0,
242.16666666666694
],
[
51.0,
288.0833333333334
],
[
52.0,
309.00000000000006
],
[
53.0,
280.75
],
[
54.0,
300.3333333333333
],
[
55.0,
239.00000000000003
],
[
56.0,
116.91666666666666
],
[
57.0,
62.58333333333333
],
[
58.0,
45.5
],
[
59.0,
43.25
],
[
60.0,
41.75
],
[
61.0,
48.5
],
[
62.0,
38.25
],
[
63.0,
28.75
],
[
64.0,
18.0
],
[
65.0,
9.5
],
[
66.0,
5.75
],
[
67.0,
1.75
],
[
68.0,
1.0
],
[
69.0,
0.0
],
[
70.0,
0.0
],
[
71.0,
0.5
],
[
72.0,
0.0
],
[
73.0,
0.0
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.0
],
[
42.0,
0.3333333333333333
],
[
43.0,
0.25
],
[
44.0,
1.0
],
[
45.0,
3.3333333333333335
],
[
46.0,
26.666666666666664
],
[
47.0,
102.24999999999999
],
[
48.0,
127.83333333333327
],
[
49.0,
174.83333333333348
],
[
50.0,
424.16666666666583
],
[
51.0,
736.9166666666675
],
[
52.0,
853.8333333333352
],
[
53.0,
733.2500000000008
],
[
54.0,
802.9166666666673
],
[
55.0,
661.7500000000005
],
[
56.0,
368.8333333333332
],
[
57.0,
291.1666666666667
],
[
58.0,
260.0833333333335
],
[
59.0,
276.33333333333337
],
[
60.0,
376.2499999999998
],
[
61.0,
390.7499999999981
],
[
62.0,
330.6666666666658
],
[
63.0,
121.08333333333323
],
[
64.0,
97.08333333333331
],
[
65.0,
78.16666666666666
],
[
66.0,
78.91666666666667
],
[
67.0,
72.33333333333333
],
[
68.0,
42.0
],
[
69.0,
27.25
],
[
70.0,
15.25
],
[
71.0,
8.25
],
[
72.0,
3.25
],
[
73.0,
2.0
],
[
74.0,
0.75
],
[
75.0,
0.25
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.0
],
[
41.0,
0.25
],
[
42.0,
0.5
],
[
43.0,
1.6666666666666665
],
[
44.0,
4.75
],
[
45.0,
41.00000000000001
],
[
46.0,
83.49999999999996
],
[
47.0,
88.25
],
[
48.0,
158.91666666666666
],
[
49.0,
290.58333333333377
],
[
50.0,
526.8333333333319
],
[
51.0,
662.6666666666667
],
[
52.0,
624.1666666666666
],
[
53.0,
552.6666666666665
],
[
54.0,
575.8333333333333
],
[
55.0,
535.3333333333334
],
[
56.0,
345.3333333333333
],
[
57.0,
284.0
],
[
58.0,
151.41666666666669
],
[
59.0,
108.83333333333333
],
[
60.0,
116.25
],
[
61.0,
100.5
],
[
62.0,
70.25
],
[
63.0,
57.0
],
[
64.0,
41.0
],
[
65.0,
28.25
],
[
66.0,
14.0
],
[
67.0,
8.25
],
[
68.0,
3.25
],
[
69.0,
1.75
],
[
70.0,
1.0
],
[
71.0,
0.5
],
[
72.0,
0.25
],
[
73.0,
0.0
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.0
],
[
40.0,
0.25
],
[
41.0,
0.75
],
[
42.0,
0.75
],
[
43.0,
1.0
],
[
44.0,
3.25
],
[
45.0,
7.75
],
[
46.0,
39.666666666666664
],
[
47.0,
144.41666666666666
],
[
48.0,
214.00000000000009
],
[
49.0,
296.5000000000001
],
[
50.0,
388.1666666666662
],
[
51.0,
627.2500000000001
],
[
52.0,
1025.4166666666697
],
[
53.0,
1167.0
],
[
54.0,
1430.7499999999993
],
[
55.0,
1751.0833333333323
],
[
56.0,
1799.0833333333326
],
[
57.0,
1327.5833333333335
],
[
58.0,
776.7500000000001
],
[
59.0,
458.5833333333333
],
[
60.0,
309.91666666666663
],
[
61.0,
227.41666666666669
],
[
62.0,
149.08333333333334
],
[
63.0,
112.66666666666666
],
[
64.0,
95.5
],
[
65.0,
75.33333333333334
],
[
66.0,
64.25
],
[
67.0,
83.75
],
[
68.0,
143.5
],
[
69.0,
144.5
],
[
70.0,
74.0
],
[
71.0,
27.0
],
[
72.0,
9.0
],
[
73.0,
5.5
],
[
74.0,
3.25
],
[
75.0,
1.25
],
[
76.0,
1.0
],
[
77.0,
0.25
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.25
],
[
40.0,
0.25
],
[
41.0,
0.25
],
[
42.0,
0.25
],
[
43.0,
0.5
],
[
44.0,
0.5
],
[
45.0,
1.25
],
[
46.0,
4.25
],
[
47.0,
19.75
],
[
48.0,
48.666666666666664
],
[
49.0,
54.66666666666667
],
[
50.0,
74.0
],
[
51.0,
268.4166666666667
],
[
52.0,
469.4166666666666
],
[
53.0,
566.1666666666666
],
[
54.0,
866.7500000000001
],
[
55.0,
1204.4166666666665
],
[
56.0,
1144.9166666666665
],
[
57.0,
734.4166666666667
],
[
58.0,
424.5
],
[
59.0,
246.58333333333334
],
[
60.0,
166.58333333333331
],
[
61.0,
111.33333333333333
],
[
62.0,
80.08333333333333
],
[
63.0,
63.25
],
[
64.0,
57.583333333333336
],
[
65.0,
45.0
],
[
66.0,
34.25
],
[
67.0,
28.5
],
[
68.0,
44.0
],
[
69.0,
42.58333333333333
],
[
70.0,
24.333333333333332
],
[
71.0,
9.75
],
[
72.0,
5.0
],
[
73.0,
3.75
],
[
74.0,
1.75
],
[
75.0,
0.25
],
[
76.0,
0.25
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.25
],
[
38.0,
0.0
],
[
39.0,
0.5
],
[
40.0,
1.0
],
[
41.0,
1.25
],
[
42.0,
2.75
],
[
43.0,
5.5
],
[
44.0,
12.333333333333334
],
[
45.0,
65.41666666666669
],
[
46.0,
413.2499999999997
],
[
47.0,
2142.4999999999995
],
[
48.0,
2882.000000000002
],
[
49.0,
2340.6666666666642
],
[
50.0,
2120.416666666657
],
[
51.0,
2151.916666666663
],
[
52.0,
2406.6666666666665
],
[
53.0,
2203.4999999999973
],
[
54.0,
2604.000000000002
],
[
55.0,
3244.5000000000005
],
[
56.0,
2941.333333333334
],
[
57.0,
1930.9166666666665
],
[
58.0,
1054.25
],
[
59.0,
544.4166666666667
],
[
60.0,
317.5833333333333
],
[
61.0,
227.08333333333334
],
[
62.0,
205.08333333333334
],
[
63.0,
159.5
],
[
64.0,
103.75
],
[
65.0,
76.0
],
[
66.0,
58.75
],
[
67.0,
48.5
],
[
68.0,
19.5
],
[
69.0,
10.0
],
[
70.0,
4.75
],
[
71.0,
1.0
],
[
72.0,
1.5
],
[
73.0,
0.75
],
[
74.0,
0.0
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.5
],
[
39.0,
0.25
],
[
40.0,
1.0
],
[
41.0,
0.75
],
[
42.0,
2.5
],
[
43.0,
2.5
],
[
44.0,
4.833333333333333
],
[
45.0,
10.583333333333332
],
[
46.0,
73.5
],
[
47.0,
309.0
],
[
48.0,
464.2499999999997
],
[
49.0,
535.416666666666
],
[
50.0,
1315.9166666666672
],
[
51.0,
2663.4166666666706
],
[
52.0,
3084.833333333348
],
[
53.0,
2670.2500000000064
],
[
54.0,
2421.583333333332
],
[
55.0,
2624.2500000000005
],
[
56.0,
2261.333333333332
],
[
57.0,
1673.7499999999984
],
[
58.0,
1215.1666666666665
],
[
59.0,
1048.4166666666683
],
[
60.0,
1464.0833333333317
],
[
61.0,
2513.833333333339
],
[
62.0,
2410.3333333333157
],
[
63.0,
949.5833333333424
],
[
64.0,
419.6666666666661
],
[
65.0,
250.25000000000009
],
[
66.0,
166.75000000000003
],
[
67.0,
147.5
],
[
68.0,
188.33333333333334
],
[
69.0,
176.25
],
[
70.0,
110.0
],
[
71.0,
52.0
],
[
72.0,
21.5
],
[
73.0,
9.75
],
[
74.0,
4.25
],
[
75.0,
2.75
],
[
76.0,
0.5
],
[
77.0,
0.0
],
[
78.0,
0.0
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
0.0,
0.0
],
[
1.0,
0.0
],
[
2.0,
0.0
],
[
3.0,
0.0
],
[
4.0,
0.0
],
[
5.0,
0.0
],
[
6.0,
0.0
],
[
7.0,
0.0
],
[
8.0,
0.0
],
[
9.0,
0.0
],
[
10.0,
0.0
],
[
11.0,
0.0
],
[
12.0,
0.0
],
[
13.0,
0.0
],
[
14.0,
0.0
],
[
15.0,
0.0
],
[
16.0,
0.0
],
[
17.0,
0.0
],
[
18.0,
0.0
],
[
19.0,
0.0
],
[
20.0,
0.0
],
[
21.0,
0.0
],
[
22.0,
0.0
],
[
23.0,
0.0
],
[
24.0,
0.0
],
[
25.0,
0.0
],
[
26.0,
0.0
],
[
27.0,
0.0
],
[
28.0,
0.0
],
[
29.0,
0.0
],
[
30.0,
0.0
],
[
31.0,
0.0
],
[
32.0,
0.0
],
[
33.0,
0.0
],
[
34.0,
0.0
],
[
35.0,
0.0
],
[
36.0,
0.0
],
[
37.0,
0.0
],
[
38.0,
0.0
],
[
39.0,
0.25
],
[
40.0,
0.5
],
[
41.0,
0.75
],
[
42.0,
2.0
],
[
43.0,
4.583333333333334
],
[
44.0,
11.166666666666666
],
[
45.0,
89.49999999999993
],
[
46.0,
247.666666666668
],
[
47.0,
314.41666666666634
],
[
48.0,
546.4166666666664
],
[
49.0,
1111.5000000000005
],
[
50.0,
2408.4999999999986
],
[
51.0,
3319.9166666666783
],
[
52.0,
3996.7500000000095
],
[
53.0,
3763.66666666667
],
[
54.0,
3525.7500000000027
],
[
55.0,
3698.2500000000023
],
[
56.0,
3647.916666666668
],
[
57.0,
3086.1666666666674
],
[
58.0,
2157.083333333333
],
[
59.0,
1166.25
],
[
60.0,
634.8333333333334
],
[
61.0,
413.6666666666667
],
[
62.0,
280.0
],
[
63.0,
188.25
],
[
64.0,
117.5
],
[
65.0,
71.5
],
[
66.0,
33.25
],
[
67.0,
16.5
],
[
68.0,
7.75
],
[
69.0,
3.5
],
[
70.0,
3.0
],
[
71.0,
0.25
],
[
72.0,
0.25
],
[
73.0,
0.25
],
[
74.0,
0.25
],
[
75.0,
0.0
],
[
76.0,
0.0
],
[
77.0,
0.25
],
[
78.0,
0.25
],
[
79.0,
0.0
],
[
80.0,
0.0
],
[
81.0,
0.0
],
[
82.0,
0.0
],
[
83.0,
0.0
],
[
84.0,
0.0
],
[
85.0,
0.0
],
[
86.0,
0.0
],
[
87.0,
0.0
],
[
88.0,
0.0
],
[
89.0,
0.0
],
[
90.0,
0.0
],
[
91.0,
0.0
],
[
92.0,
0.0
],
[
93.0,
0.0
],
[
94.0,
0.0
],
[
95.0,
0.0
],
[
96.0,
0.0
],
[
97.0,
0.0
],
[
98.0,
0.0
],
[
99.0,
0.0
],
[
100.0,
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_per_sequence_gc_content_plot",
"title": "FastQC: Per Sequence GC Content",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [
{
"name": "Percentages",
"ylab": "Percentage",
"tt_suffix": "%",
"title": "FastQC: Per Sequence GC Content
Percentages, 10 samples"
},
{
"name": "Counts",
"ylab": "Count",
"tt_suffix": "",
"title": "FastQC: Per Sequence GC Content
Counts, 10 samples"
}
],
"xTitle": null,
"yTitle": null,
"xlab": "% GC",
"ylab": "Percentage",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "{point.x}% GC: {point.y}",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": 0,
"xmax": 100,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#d9534f",
"CHILD12_R1": "#d9534f",
"CHILD13_R1": "#f0ad4e",
"CHILD14_R1": "#d9534f",
"CHILD15_R1": "#d9534f",
"CHILD21_R1": "#d9534f",
"CHILD22_R1": "#d9534f",
"CHILD23_R1": "#d9534f",
"CHILD24_R1": "#d9534f",
"CHILD25_R1": "#d9534f"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_per_base_n_content_plot": {
"id": "fastqc_per_base_n_content_plot",
"anchor": "fastqc_per_base_n_content_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Per Base N Content",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"shapes": [
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 20,
"y1": 100
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 5,
"y1": 20
},
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 0,
"y1": 5
},
{
"fillcolor": "#e6c3c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 20,
"y1": 100
},
{
"fillcolor": "#e6dcc3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 5,
"y1": 20
},
{
"fillcolor": "#c3e6c3",
"layer": "below",
"line": {
"width": 0
},
"type": "rect",
"x0": 0,
"x1": 1,
"xref": "paper",
"y0": 0,
"y1": 5
}
],
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_per_base_n_content_plot",
"label": "1",
"uid": "fastqc_per_base_n_content_plot",
"dconfig": {
"title": "FastQC: Per Base N Content
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Per Base N Content
10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": " bp",
"title": {
"text": "Position in Read (bp)"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "%",
"title": {
"text": "Percentage N-Count"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": 100,
"minallowed": 0,
"maxallowed": null
},
"range": [
0,
5
]
}
},
"trace_params": {
"hovertemplate": "%{text}
Base %{x}: %{y:.2f}%",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.25451901101184293
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.05090380220236859
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.2102902004766578
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.04205804009533156
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.25513303365326206
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.05102660673065241
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.20882639565641095
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.041765279131282196
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.2590034533793784
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.05180069067587567
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.0
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.0
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.0
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.0
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.0
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.0
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.0
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.0
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
1,
0.0
],
[
2,
0.0
],
[
3,
0.0
],
[
4,
0.0
],
[
5,
0.0
],
[
6,
0.0
],
[
7,
0.0
],
[
8,
0.0
],
[
9,
0.0
],
[
10,
0.0
],
[
15,
0.0
],
[
20,
0.0
],
[
25,
0.0
],
[
30,
0.0
],
[
35,
0.0
],
[
40,
0.0
],
[
45,
0.0
],
[
50,
0.0
],
[
55,
0.0
],
[
60,
0.0
],
[
65,
0.0
],
[
70,
0.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
0.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
0.0
],
[
300,
0.0
]
],
"color": "#5cb85c",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_per_base_n_content_plot",
"title": "FastQC: Per Base N Content",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Position in Read (bp)",
"ylab": "Percentage N-Count",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "Base {point.x}: {point.y:.2f}%",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": 0,
"xmax": null,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": 100,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": 5,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": [
{
"from_": 20,
"to": 100,
"color": "#e6c3c3"
},
{
"from_": 5,
"to": 20,
"color": "#e6dcc3"
},
{
"from_": 0,
"to": 5,
"color": "#c3e6c3"
}
],
"x_lines": null,
"y_lines": null,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#5cb85c",
"CHILD12_R1": "#5cb85c",
"CHILD13_R1": "#5cb85c",
"CHILD14_R1": "#5cb85c",
"CHILD15_R1": "#5cb85c",
"CHILD21_R1": "#5cb85c",
"CHILD22_R1": "#5cb85c",
"CHILD23_R1": "#5cb85c",
"CHILD24_R1": "#5cb85c",
"CHILD25_R1": "#5cb85c"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_sequence_length_distribution_plot": {
"id": "fastqc_sequence_length_distribution_plot",
"anchor": "fastqc_sequence_length_distribution_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Sequence Length Distribution",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_sequence_length_distribution_plot",
"label": "1",
"uid": "fastqc_sequence_length_distribution_plot",
"dconfig": {
"title": "FastQC: Sequence Length Distribution
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Sequence Length Distribution
10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": " bp",
"title": {
"text": "Sequence Length (bp)"
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": "Read Count"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}
%{x}: %{y}",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
80,
1.0
],
[
85,
1.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
2.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
1.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
1.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
744.0
],
[
300,
18502.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
85,
1.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
3.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
1.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
2.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
183.0
],
[
300,
21209.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
70,
1.0
],
[
75,
0.0
],
[
80,
0.0
],
[
85,
5.0
],
[
90,
1.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
1.0
],
[
180,
0.0
],
[
185,
1.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
2.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
1.0
],
[
295,
244.0
],
[
300,
7975.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
80,
5.0
],
[
85,
4.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
0.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
0.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
2.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
32.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
1.0
],
[
215,
1.0
],
[
220,
3.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
1435.0
],
[
300,
20066.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
70,
2.0
],
[
75,
0.0
],
[
80,
3.0
],
[
85,
3.0
],
[
90,
0.0
],
[
95,
0.0
],
[
100,
0.0
],
[
105,
0.0
],
[
110,
0.0
],
[
115,
2.0
],
[
120,
0.0
],
[
125,
0.0
],
[
130,
0.0
],
[
135,
0.0
],
[
140,
0.0
],
[
145,
1.0
],
[
150,
0.0
],
[
155,
0.0
],
[
160,
0.0
],
[
165,
2.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
1.0
],
[
215,
0.0
],
[
220,
0.0
],
[
225,
7.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
505.0
],
[
300,
15690.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
296,
1.0
],
[
297,
307.0
],
[
298,
114.0
],
[
299,
118.0
],
[
300,
258.0
],
[
301,
37833.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
296,
1.0
],
[
297,
21.0
],
[
298,
13.0
],
[
299,
24.0
],
[
300,
150.0
],
[
301,
20321.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
155,
2.0
],
[
160,
0.0
],
[
165,
0.0
],
[
170,
0.0
],
[
175,
0.0
],
[
180,
0.0
],
[
185,
0.0
],
[
190,
0.0
],
[
195,
0.0
],
[
200,
0.0
],
[
205,
0.0
],
[
210,
0.0
],
[
215,
1.0
],
[
220,
0.0
],
[
225,
0.0
],
[
230,
0.0
],
[
235,
0.0
],
[
240,
0.0
],
[
245,
0.0
],
[
250,
0.0
],
[
255,
0.0
],
[
260,
0.0
],
[
265,
0.0
],
[
270,
0.0
],
[
275,
0.0
],
[
280,
0.0
],
[
285,
0.0
],
[
290,
0.0
],
[
295,
1175.0
],
[
300,
89186.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
295,
98.0
],
[
296,
43.0
],
[
297,
880.0
],
[
298,
3235.0
],
[
299,
553.0
],
[
300,
1493.0
],
[
301,
85233.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
30,
1.0
],
[
40,
0.0
],
[
50,
0.0
],
[
60,
0.0
],
[
70,
0.0
],
[
80,
0.0
],
[
90,
0.0
],
[
100,
0.0
],
[
110,
0.0
],
[
120,
0.0
],
[
130,
0.0
],
[
140,
0.0
],
[
150,
0.0
],
[
160,
0.0
],
[
170,
0.0
],
[
180,
0.0
],
[
190,
0.0
],
[
200,
0.0
],
[
210,
0.0
],
[
220,
0.0
],
[
230,
0.0
],
[
240,
0.0
],
[
250,
0.0
],
[
260,
0.0
],
[
270,
0.0
],
[
280,
0.0
],
[
290,
1444.0
],
[
300,
102403.0
]
],
"color": "#f0ad4e",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_sequence_length_distribution_plot",
"title": "FastQC: Sequence Length Distribution",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Sequence Length (bp)",
"ylab": "Read Count",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": "{point.x} bp: {point.y}",
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"categories": false,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#f0ad4e",
"CHILD12_R1": "#f0ad4e",
"CHILD13_R1": "#f0ad4e",
"CHILD14_R1": "#f0ad4e",
"CHILD15_R1": "#f0ad4e",
"CHILD21_R1": "#f0ad4e",
"CHILD22_R1": "#f0ad4e",
"CHILD23_R1": "#f0ad4e",
"CHILD24_R1": "#f0ad4e",
"CHILD25_R1": "#f0ad4e"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_sequence_duplication_levels_plot": {
"id": "fastqc_sequence_duplication_levels_plot",
"anchor": "fastqc_sequence_duplication_levels_plot",
"plot_type": "xy_line",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Sequence Duplication Levels",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"hoverdistance": -1
},
"datasets": [
{
"plot_id": "fastqc_sequence_duplication_levels_plot",
"label": "1",
"uid": "fastqc_sequence_duplication_levels_plot",
"dconfig": {
"title": "FastQC: Sequence Duplication Levels
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Sequence Duplication Levels
10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": "Sequence Duplication Level"
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
},
"type": "category"
},
"yaxis": {
"hoverformat": ",.2f",
"ticksuffix": "%",
"title": {
"text": "% of Library"
},
"rangemode": "tozero",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": 0,
"maxallowed": 100
}
}
},
"trace_params": {
"hovertemplate": "%{text}
%{x}: %{y}",
"mode": "lines",
"line": {
"width": 2
}
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"lines": [
{
"name": "CHILD11_R1",
"pairs": [
[
1.0,
22.18990234780802
],
[
2.0,
5.994182422605443
],
[
3.0,
3.5061292333264076
],
[
4.0,
2.4516933305630584
],
[
5.0,
2.077706212341575
],
[
6.0,
1.5582796592561812
],
[
7.0,
1.1271556201953044
],
[
8.0,
1.5375025971327654
],
[
9.0,
1.2154581342198214
],
[
">10",
19.987533762725953
],
[
">50",
13.042800747974237
],
[
">100",
22.33014751714108
],
[
">500",
2.9815084147101603
],
[
">1k",
0.0
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD12_R1",
"pairs": [
[
1.0,
22.94967054535259
],
[
2.0,
6.159166316182999
],
[
3.0,
3.0982756203560915
],
[
4.0,
2.6169447170428524
],
[
5.0,
2.1963643160895368
],
[
6.0,
1.9066311509883638
],
[
7.0,
1.7664376840039255
],
[
8.0,
1.1963175849338754
],
[
9.0,
1.429973363241273
],
[
">10",
13.47726529277069
],
[
">50",
14.159540165428291
],
[
">100",
26.290948175148372
],
[
">500",
2.752465068461143
],
[
">1k",
0.0
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD13_R1",
"pairs": [
[
1.0,
26.837565301907425
],
[
2.0,
6.754950795772081
],
[
3.0,
4.701737334467258
],
[
4.0,
2.527031952375167
],
[
5.0,
3.766249544405297
],
[
6.0,
1.968169116753736
],
[
7.0,
1.7859312355728345
],
[
8.0,
1.6522901227068398
],
[
9.0,
1.6401409306281132
],
[
">10",
16.66869153201312
],
[
">50",
15.21078848256591
],
[
">100",
16.48645365083222
],
[
">500",
0.0
],
[
">1k",
0.0
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD14_R1",
"pairs": [
[
1.0,
23.78764675855028
],
[
2.0,
6.1348554457283395
],
[
3.0,
3.9120144786300983
],
[
4.0,
2.598728479279781
],
[
5.0,
1.6706111652512876
],
[
6.0,
1.9768898788806906
],
[
7.0,
1.4617847695948767
],
[
8.0,
1.6334864726901481
],
[
9.0,
1.1276625365446193
],
[
">10",
18.93359320618126
],
[
">50",
12.469256113972806
],
[
">100",
24.29347069469581
],
[
">500",
0.0
],
[
">1k",
0.0
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD15_R1",
"pairs": [
[
1.0,
22.644301924025655
],
[
2.0,
6.117414898865318
],
[
3.0,
3.607548100641342
],
[
4.0,
2.4913665515540204
],
[
5.0,
2.127528367044894
],
[
6.0,
2.220029600394672
],
[
7.0,
1.4676862358164777
],
[
8.0,
1.2826837691169217
],
[
9.0,
1.110014800197336
],
[
">10",
19.943265910212133
],
[
">50",
8.45461272816971
],
[
">100",
28.53354711396152
],
[
">500",
0.0
],
[
">1k",
0.0
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD21_R1",
"pairs": [
[
1.0,
8.042763583650437
],
[
2.0,
3.2357433149543113
],
[
3.0,
2.0035722606197095
],
[
4.0,
1.1286272682560639
],
[
5.0,
0.8542362351479381
],
[
6.0,
0.9318940747068417
],
[
7.0,
0.9422484533146954
],
[
8.0,
0.5177189303926898
],
[
9.0,
0.6756232041624602
],
[
">10",
9.114441769563305
],
[
">50",
8.384458077709612
],
[
">100",
28.238979058269265
],
[
">500",
4.788900106132381
],
[
">1k",
31.14079366312029
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD22_R1",
"pairs": [
[
1.0,
7.847053093034583
],
[
2.0,
3.2830004870920604
],
[
3.0,
2.0311738918655626
],
[
4.0,
1.5976619581100828
],
[
5.0,
0.9254749147588894
],
[
6.0,
0.9059912323429129
],
[
7.0,
0.6819288845591817
],
[
8.0,
0.7793472966390648
],
[
9.0,
0.5260594252313687
],
[
">10",
12.752070141256697
],
[
">50",
9.736970287384315
],
[
">100",
18.855333658061372
],
[
">500",
17.778860204578663
],
[
">1k",
22.299074525085242
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD23_R1",
"pairs": [
[
1.0,
4.97985923597893
],
[
2.0,
2.0893276083396044
],
[
3.0,
1.3279624629277147
],
[
4.0,
1.0358107210836174
],
[
5.0,
0.7912443008277632
],
[
6.0,
0.7436589792395202
],
[
7.0,
0.5577442344296402
],
[
8.0,
0.4160949050506839
],
[
9.0,
0.3983887388783144
],
[
">10",
6.861139391793191
],
[
">50",
5.200079677747776
],
[
">100",
10.698950909654286
],
[
">500",
11.989287769465715
],
[
">1k",
46.28391837457394
],
[
">5k",
6.626532690009296
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD24_R1",
"pairs": [
[
1.0,
6.271917845632818
],
[
2.0,
2.89725241710821
],
[
3.0,
1.681324083683837
],
[
4.0,
1.162396897361665
],
[
5.0,
0.6991861036761894
],
[
6.0,
0.5374993172010707
],
[
7.0,
0.5888457966897908
],
[
8.0,
0.4806904462773803
],
[
9.0,
0.4227890970666958
],
[
">10",
6.227126235866062
],
[
">50",
5.8709783143060035
],
[
">100",
25.38591795488065
],
[
">500",
25.313814387939036
],
[
">1k",
22.460261102310593
],
[
">5k",
0.0
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
},
{
"name": "CHILD25_R1",
"pairs": [
[
1.0,
4.633695400970649
],
[
2.0,
2.041445189122564
],
[
3.0,
1.2826438641090825
],
[
4.0,
0.9590940605500347
],
[
5.0,
0.7173946537246745
],
[
6.0,
0.5719898312918881
],
[
7.0,
0.5122871889684923
],
[
8.0,
0.43139973807873044
],
[
9.0,
0.39865957938525537
],
[
">10",
6.112780217240582
],
[
">50",
4.655843155380941
],
[
">100",
10.827363069100993
],
[
">500",
8.247631153223942
],
[
">1k",
53.1690547723596
],
[
">5k",
5.4387181264925655
],
[
">10k+",
0.0
]
],
"color": "#d9534f",
"width": 2,
"dash": null,
"showlegend": true,
"marker": null
}
]
}
],
"pconfig": {
"id": "fastqc_sequence_duplication_levels_plot",
"title": "FastQC: Sequence Duplication Levels",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Sequence Duplication Level",
"ylab": "% of Library",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": "%",
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": 2,
"xmin": null,
"xmax": null,
"ymin": 0,
"ymax": 100,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": false,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"categories": true,
"smooth_points": 500,
"smooth_points_sumcounts": null,
"extra_series": null,
"style": null,
"hide_zero_cats": false,
"hide_empty": false,
"colors": {
"CHILD11_R1": "#d9534f",
"CHILD12_R1": "#d9534f",
"CHILD13_R1": "#d9534f",
"CHILD14_R1": "#d9534f",
"CHILD15_R1": "#d9534f",
"CHILD21_R1": "#d9534f",
"CHILD22_R1": "#d9534f",
"CHILD23_R1": "#d9534f",
"CHILD24_R1": "#d9534f",
"CHILD25_R1": "#d9534f"
}
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"yaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_overrepresented_sequences_plot": {
"id": "fastqc_overrepresented_sequences_plot",
"anchor": "fastqc_overrepresented_sequences_plot",
"plot_type": "bar_graph",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 390,
"hoverlabel": {
"namelength": -1,
"bgcolor": "rgba(255, 255, 255, 0.8)",
"font": {
"color": "black"
}
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": true,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Overrepresented sequences sample summary",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)",
"showgrid": false,
"categoryorder": "trace",
"type": "category"
},
"barmode": "relative",
"bargroupgap": 0,
"bargap": 0.2,
"legend": {
"tracegroupgap": 0,
"traceorder": "normal"
},
"hovermode": "y unified"
},
"datasets": [
{
"plot_id": "fastqc_overrepresented_sequences_plot",
"label": "1",
"uid": "fastqc_overrepresented_sequences_plot",
"dconfig": {
"title": "FastQC: Overrepresented sequences sample summary
10 samples"
},
"layout": {
"title": {
"text": "FastQC: Overrepresented sequences sample summary
10 samples"
},
"xaxis": {
"title": {
"text": "Percentage of Total Sequences"
},
"hoverformat": ",.2f",
"ticksuffix": "%",
"autorangeoptions": {
"minallowed": 0,
"maxallowed": 77.19166474077501
}
},
"yaxis": {
"title": null,
"hoverformat": null,
"ticksuffix": ""
},
"showlegend": true
},
"trace_params": {
"hovertemplate": "%{meta}: %{x}",
"orientation": "h",
"marker": {
"line": {
"width": 0
}
},
"textposition": "inside",
"insidetextanchor": "start"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"cats": [
{
"name": "Top overrepresented sequence",
"color": "124,181,236",
"data": [
5.4387181264925655,
2.660184628830502,
6.626532690009296,
9.727228446176326,
8.335274779322306,
2.0226936359151457,
1.1508654693953315,
2.587777912768801,
2.752465068461143,
2.9815084147101603
],
"data_pct": []
},
{
"name": "Sum of remaining overrepresented sequences",
"color": "67,67,72",
"data": [
71.75294661428245,
71.32899983612823,
69.60293922358458,
66.23477837311249,
65.95998032668065,
48.57548100641338,
45.90004176527912,
47.41829668327058,
46.586289078928914,
49.40785372948263
],
"data_pct": []
}
],
"samples": [
"CHILD25_R1",
"CHILD24_R1",
"CHILD23_R1",
"CHILD22_R1",
"CHILD21_R1",
"CHILD15_R1",
"CHILD14_R1",
"CHILD13_R1",
"CHILD12_R1",
"CHILD11_R1"
]
}
],
"pconfig": {
"id": "fastqc_overrepresented_sequences_plot",
"title": "FastQC: Overrepresented sequences sample summary",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": false,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": "Percentage of Total Sequences",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": "%",
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": 2,
"xmin": null,
"xmax": null,
"ymin": 0,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": 100,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"stacking": "relative",
"hide_zero_cats": true,
"sort_samples": true,
"use_legend": true,
"suffix": null,
"lab_format": null
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [
"xaxis"
],
"square": false,
"flat": false,
"defer_render": false
},
"fastqc_top_overrepresented_sequences_table": {
"id": "fastqc_top_overrepresented_sequences_table",
"anchor": "fastqc_top_overrepresented_sequences_table",
"plot_type": "violin",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 40,
"l": 60,
"pad": 0,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Top overrepresented sequences",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": false,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.1)",
"tickfont": {
"color": "rgba(0,0,0,0.5)",
"size": 9
},
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.1)",
"tickfont": {
"color": "rgba(0,0,0,0.5)",
"size": 9
},
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"violingap": 0,
"grid": {
"columns": 1,
"roworder": "top to bottom",
"ygap": 0.4
}
},
"datasets": [
{
"plot_id": "fastqc_top_overrepresented_sequences_table",
"label": "1",
"uid": "fastqc_top_overrepresented_sequences_table",
"dconfig": {
"ylab": "",
"title": "FastQC: Top overrepresented sequences
20 samples"
},
"layout": {
"title": {
"text": "FastQC: Top overrepresented sequences
20 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": null
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": ""
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}: %{x}",
"orientation": "h",
"box": {
"visible": true
},
"meanline": {
"visible": true
},
"fillcolor": "#b5b5b5",
"line": {
"width": 2,
"color": "#b5b5b5"
},
"opacity": 0.5,
"points": false,
"hoveron": "points"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 20,
"metrics": [
"fastqc-samples",
"fastqc-total_count",
"fastqc-total_percent"
],
"header_by_metric": {
"fastqc-samples": {
"title": "Reports",
"description": "Number of FastQC reports where this sequence is founds as overrepresented",
"suffix": "",
"dmin": 0.0,
"dmax": 10,
"hidden": false,
"xaxis": {
"ticksuffix": null,
"tickvals": null,
"range": [
-0.05,
10.05025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": null
},
"fastqc-total_count": {
"title": "Occurrences",
"description": "Total number of occurrences of the sequence (among the samples where the sequence is overrepresented)",
"suffix": "",
"dmin": 0.0,
"dmax": 19174,
"hidden": false,
"xaxis": {
"ticksuffix": null,
"tickvals": null,
"range": [
-95.87,
19270.34935
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": null
},
"fastqc-total_percent": {
"title": "% of all reads",
"description": "Total number of occurrences as the percentage of all reads (among samples where the sequence is overrepresented)",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "",
"color": null,
"hoverformat": ".2f"
}
},
"violin_value_by_sample_by_metric": {
"fastqc-samples": {
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 10,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 10,
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 10,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 10,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 10,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 10
},
"fastqc-total_count": {
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 12813,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 10959,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 9808,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 9605,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 14449,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 19174,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 5881,
"CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 5727,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 5901,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 7526,
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 4406,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 3426,
"CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 3732,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 3158,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 3796,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 4804,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 6601,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 5549,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 2058,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 4475
},
"fastqc-total_percent": {
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 2.9690305986490713,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 2.5394213947237314,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 2.272711473624451,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 2.2256722781568974,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 3.348124804486102,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 4.443002630023983,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 1.362746347510746,
"CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": 1.3270614406043262,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 1.3673807510050862,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": 1.7439260349202304,
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 1.0209590898031538,
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 0.7938733185804823,
"CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 0.8647796920438877,
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 0.7317723117563231,
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 0.8796097832257765,
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 1.1131837193405243,
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 1.5295848733069943,
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 1.2858152495046982,
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": 0.4768801195676102,
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": 1.0369477818586275
}
},
"scatter_value_by_sample_by_metric": {
"fastqc-samples": {},
"fastqc-total_count": {},
"fastqc-total_percent": {}
},
"all_samples": [
"CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA",
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA",
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT"
],
"scatter_trace_params": {
"mode": "markers",
"marker": {
"size": 4,
"color": "#0b79e6"
},
"showlegend": false,
"hovertemplate": "%{text}: %{x}",
"hoverlabel": {
"bgcolor": "white"
}
}
}
],
"pconfig": {
"id": "fastqc_top_overrepresented_sequences_table",
"title": "FastQC: Top overrepresented sequences",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"namespace": "FastQC",
"save_file": false,
"raw_data_fn": null,
"defaultsort": null,
"sortRows": true,
"sort_rows": false,
"only_defined_headers": true,
"col1_header": "Overrepresented sequence",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [],
"square": false,
"flat": false,
"defer_render": false,
"violin_height": 70,
"extra_height": 63,
"no_violin": false,
"show_table": true,
"show_table_by_default": true,
"n_samples": 20,
"main_table_dt": {
"id": "fastqc_top_overrepresented_sequences_table",
"anchor": "fastqc_top_overrepresented_sequences_table_table",
"pconfig": {
"id": "fastqc_top_overrepresented_sequences_table",
"title": "FastQC: Top overrepresented sequences",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"namespace": "FastQC",
"save_file": false,
"raw_data_fn": null,
"defaultsort": null,
"sortRows": true,
"sort_rows": false,
"only_defined_headers": true,
"col1_header": "Overrepresented sequence",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null
},
"sections": [
{
"column_by_key": {
"samples": {
"rid": "fastqc-samples",
"title": "Reports",
"description": "Number of FastQC reports where this sequence is founds as overrepresented",
"scale": "Greens",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 10,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": null,
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"total_count": {
"rid": "fastqc-total_count",
"title": "Occurrences",
"description": "Total number of occurrences of the sequence (among the samples where the sequence is overrepresented)",
"scale": "Blues",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": null,
"dmax": 19174,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": null,
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"total_percent": {
"rid": "fastqc-total_percent",
"title": "% of all reads",
"description": "Total number of occurrences as the percentage of all reads (among samples where the sequence is overrepresented)",
"scale": "Blues",
"hidden": false,
"placement": 1000.0,
"namespace": "",
"colour": null,
"color": null,
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
}
},
"rows_by_sgroup": {
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 2.9690305986490713,
"total_count": 12813,
"samples": 10
},
"formatted_data": {
"total_percent": "2.9690",
"total_count": "12,813",
"samples": "10"
}
}
],
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 2.5394213947237314,
"total_count": 10959,
"samples": 10
},
"formatted_data": {
"total_percent": "2.5394",
"total_count": "10,959",
"samples": "10"
}
}
],
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 2.272711473624451,
"total_count": 9808,
"samples": 10
},
"formatted_data": {
"total_percent": "2.2727",
"total_count": "9,808",
"samples": "10"
}
}
],
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 2.2256722781568974,
"total_count": 9605,
"samples": 10
},
"formatted_data": {
"total_percent": "2.2257",
"total_count": "9,605",
"samples": "10"
}
}
],
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 3.348124804486102,
"total_count": 14449,
"samples": 10
},
"formatted_data": {
"total_percent": "3.3481",
"total_count": "14,449",
"samples": "10"
}
}
],
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 4.443002630023983,
"total_count": 19174,
"samples": 10
},
"formatted_data": {
"total_percent": "4.4430",
"total_count": "19,174",
"samples": "10"
}
}
],
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 1.362746347510746,
"total_count": 5881,
"samples": 10
},
"formatted_data": {
"total_percent": "1.3627",
"total_count": "5,881",
"samples": "10"
}
}
],
"CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT": [
{
"sample": "CCTACGGGCGGCAGCAGTGGGGAATATTGCACAATGGGGGAAACCCTGAT",
"raw_data": {
"total_percent": 1.3270614406043262,
"total_count": 5727,
"samples": 10
},
"formatted_data": {
"total_percent": "1.3271",
"total_count": "5,727",
"samples": "10"
}
}
],
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": [
{
"sample": "CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA",
"raw_data": {
"total_percent": 1.3673807510050862,
"total_count": 5901,
"samples": 10
},
"formatted_data": {
"total_percent": "1.3674",
"total_count": "5,901",
"samples": "10"
}
}
],
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA": [
{
"sample": "CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAA",
"raw_data": {
"total_percent": 1.7439260349202304,
"total_count": 7526,
"samples": 10
},
"formatted_data": {
"total_percent": "1.7439",
"total_count": "7,526",
"samples": "10"
}
}
],
"CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 1.0209590898031538,
"total_count": 4406,
"samples": 10
},
"formatted_data": {
"total_percent": "1.0210",
"total_count": "4,406",
"samples": "10"
}
}
],
"CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGTGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 0.7938733185804823,
"total_count": 3426,
"samples": 10
},
"formatted_data": {
"total_percent": "0.7939",
"total_count": "3,426",
"samples": "10"
}
}
],
"CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": [
{
"sample": "CCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"raw_data": {
"total_percent": 0.8647796920438877,
"total_count": 3732,
"samples": 10
},
"formatted_data": {
"total_percent": "0.8648",
"total_count": "3,732",
"samples": "10"
}
}
],
"CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGAGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 0.7317723117563231,
"total_count": 3158,
"samples": 10
},
"formatted_data": {
"total_percent": "0.7318",
"total_count": "3,158",
"samples": "10"
}
}
],
"CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGTGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 0.8796097832257765,
"total_count": 3796,
"samples": 10
},
"formatted_data": {
"total_percent": "0.8796",
"total_count": "3,796",
"samples": "10"
}
}
],
"CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGGGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 1.1131837193405243,
"total_count": 4804,
"samples": 10
},
"formatted_data": {
"total_percent": "1.1132",
"total_count": "4,804",
"samples": "10"
}
}
],
"CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGGGGCAGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 1.5295848733069943,
"total_count": 6601,
"samples": 10
},
"formatted_data": {
"total_percent": "1.5296",
"total_count": "6,601",
"samples": "10"
}
}
],
"CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": [
{
"sample": "CCTACGGGGGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"raw_data": {
"total_percent": 1.2858152495046982,
"total_count": 5549,
"samples": 10
},
"formatted_data": {
"total_percent": "1.2858",
"total_count": "5,549",
"samples": "10"
}
}
],
"CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT": [
{
"sample": "CCTACGGGCGGCTGCAGTGGGGAATATTGCACAATGGGCGAAAGCCTGAT",
"raw_data": {
"total_percent": 0.4768801195676102,
"total_count": 2058,
"samples": 10
},
"formatted_data": {
"total_percent": "0.4769",
"total_count": "2,058",
"samples": "10"
}
}
],
"CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA": [
{
"sample": "CCTACGGGGGGCTGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAA",
"raw_data": {
"total_percent": 1.0369477818586275,
"total_count": 4475,
"samples": 10
},
"formatted_data": {
"total_percent": "1.0369",
"total_count": "4,475",
"samples": "10"
}
}
]
}
}
],
"headers_in_order": {
"1000.0": [
[
0,
"samples"
],
[
0,
"total_count"
],
[
0,
"total_percent"
]
]
}
}
},
"fastqc-status-check-heatmap": {
"id": "fastqc-status-check-heatmap",
"anchor": "fastqc-status-check-heatmap",
"plot_type": "heatmap",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 650,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 65,
"l": 60,
"pad": 5,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "FastQC: Status Checks",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)",
"type": "category",
"tickmode": "array",
"tickvals": [
0,
1,
2,
3,
4,
5,
6,
7,
8,
9,
10
],
"ticktext": [
"Basic
Statistics",
"Per Base
Sequence
Quality",
"Per Tile
Sequence
Quality",
"Per
Sequence
Quality
Scores",
"Per Base
Sequence
Content",
"Per
Sequence
GC Content",
"Per Base N
Content",
"Sequence
Length
Distribution",
"Sequence
Duplication
Levels",
"Overrepresented
Sequences",
"Adapter
Content"
],
"tickangle": 0,
"showgrid": false
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.05)",
"tickfont": {
"color": "rgba(0,0,0,1)",
"size": 10
},
"zerolinecolor": "rgba(0,0,0,0.05)",
"type": "category",
"tickmode": "array",
"tickvals": [
0,
1,
2,
3,
4,
5,
6,
7,
8,
9
],
"ticktext": [
"CHILD11_R1",
"CHILD12_R1",
"CHILD13_R1",
"CHILD14_R1",
"CHILD15_R1",
"CHILD21_R1",
"CHILD22_R1",
"CHILD23_R1",
"CHILD24_R1",
"CHILD25_R1"
],
"showgrid": false,
"autorange": "reversed",
"ticklabelposition": "outside right"
}
},
"datasets": [
{
"plot_id": "fastqc-status-check-heatmap",
"label": "1",
"uid": "fastqc-status-check-heatmap",
"dconfig": {
"title": "FastQC: Status Checks
11 samples"
},
"layout": {
"title": {
"text": "FastQC: Status Checks
11 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": null,
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": ",.1f",
"ticksuffix": "",
"title": null,
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
}
},
"trace_params": {
"colorscale": [
[
0.0,
"#ffffff"
],
[
0.25,
"#d9534f"
],
[
0.5,
"#fee391"
],
[
1.0,
"#5cb85c"
]
],
"reversescale": false,
"showscale": false,
"zmin": 0,
"zmax": 1,
"hovertemplate": "Section Name: %{x}
Sample: %{y}
z: %{z}"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 11,
"rows": [
[
1,
0.25,
0.25,
0.5,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.25,
0.5,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.25,
0.5,
0.25,
0.5,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.25,
0.5,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.25,
0.5,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.5,
1,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.5,
1,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.5,
1,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.5,
1,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
],
[
1,
0.25,
0.5,
1,
0.25,
0.25,
1,
0.5,
0.25,
0.25,
1
]
],
"xcats": [
"Basic Statistics",
"Per Base Sequence Quality",
"Per Tile Sequence Quality",
"Per Sequence Quality Scores",
"Per Base Sequence Content",
"Per Sequence GC Content",
"Per Base N Content",
"Sequence Length Distribution",
"Sequence Duplication Levels",
"Overrepresented Sequences",
"Adapter Content"
],
"ycats": [
"CHILD11_R1",
"CHILD12_R1",
"CHILD13_R1",
"CHILD14_R1",
"CHILD15_R1",
"CHILD21_R1",
"CHILD22_R1",
"CHILD23_R1",
"CHILD24_R1",
"CHILD25_R1"
]
}
],
"pconfig": {
"id": "fastqc-status-check-heatmap",
"title": "FastQC: Status Checks",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": "Section Name",
"ylab": "Sample",
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": 2,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": 1,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"zlab": "z",
"min": 0,
"max": 1,
"xcats_samples": false,
"ycats_samples": true,
"colstops": [
[
0,
"#ffffff"
],
[
0.25,
"#d9534f"
],
[
0.5,
"#fee391"
],
[
1,
"#5cb85c"
]
],
"reverseColors": false,
"reverse_colors": false,
"legend": false,
"datalabels": null,
"display_values": false,
"angled_xticks": false
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [],
"square": false,
"flat": false,
"defer_render": false,
"xcats_samples": false,
"ycats_samples": true,
"min": 0.0,
"max": 1.0
},
"general_stats_table": {
"id": "general_stats_table",
"anchor": "general_stats_table",
"plot_type": "violin",
"layout": {
"autosize": true,
"colorway": [
"#7cb5ec",
"#434348",
"#90ed7d",
"#f7a35c",
"#8085e9",
"#f15c80",
"#e4d354",
"#2b908f",
"#f45b5b",
"#91e8e1"
],
"font": {
"family": "'Lucida Grande', 'Open Sans', verdana, arial, sans-serif"
},
"height": 500,
"hoverlabel": {
"namelength": -1
},
"margin": {
"b": 40,
"l": 60,
"pad": 0,
"r": 15,
"t": 50
},
"modebar": {
"activecolor": "rgba(0, 0, 0, 1)",
"bgcolor": "rgba(0, 0, 0, 0)",
"color": "rgba(0, 0, 0, 0.5)"
},
"paper_bgcolor": "white",
"plot_bgcolor": "white",
"showlegend": false,
"title": {
"font": {
"size": 20
},
"text": "General Statistics",
"x": 0.5,
"xanchor": "center"
},
"xaxis": {
"automargin": false,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.1)",
"tickfont": {
"color": "rgba(0,0,0,0.5)",
"size": 9
},
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"yaxis": {
"automargin": true,
"color": "rgba(0,0,0,0.3)",
"gridcolor": "rgba(0,0,0,0.1)",
"tickfont": {
"color": "rgba(0,0,0,0.5)",
"size": 9
},
"zerolinecolor": "rgba(0,0,0,0.1)"
},
"violingap": 0,
"grid": {
"columns": 1,
"roworder": "top to bottom",
"ygap": 0.4
}
},
"datasets": [
{
"plot_id": "general_stats_table",
"label": "1",
"uid": "general_stats_table",
"dconfig": {
"ylab": "",
"title": "General Statistics
10 samples"
},
"layout": {
"title": {
"text": "General Statistics
10 samples"
},
"xaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": null
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
},
"yaxis": {
"hoverformat": null,
"ticksuffix": "",
"title": {
"text": ""
},
"rangemode": "normal",
"autorangeoptions": {
"clipmin": null,
"clipmax": null,
"minallowed": null,
"maxallowed": null
}
}
},
"trace_params": {
"hovertemplate": "%{text}: %{x}",
"orientation": "h",
"box": {
"visible": true
},
"meanline": {
"visible": true
},
"fillcolor": "#b5b5b5",
"line": {
"width": 2,
"color": "#b5b5b5"
},
"opacity": 0.5,
"points": false,
"hoveron": "points"
},
"pct_range": {
"xaxis": {
"min": 0,
"max": 100
},
"yaxis": {
"min": 0,
"max": 100
}
},
"n_samples": 10,
"metrics": [
"fastqc-percent_duplicates",
"fastqc-percent_gc",
"fastqc-avg_sequence_length",
"fastqc-median_sequence_length",
"fastqc-percent_fails",
"fastqc-total_sequences"
],
"header_by_metric": {
"fastqc-percent_duplicates": {
"title": "Dups",
"description": "% duplicate reads",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": ".2f"
},
"fastqc-percent_gc": {
"title": "GC",
"description": "Average % GC content",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": false,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": ".2f"
},
"fastqc-avg_sequence_length": {
"title": "Avg len",
"description": "Average read length",
"suffix": " bp",
"dmin": 0.0,
"dmax": 300.984120798831,
"hidden": true,
"xaxis": {
"ticksuffix": " bp",
"tickvals": null,
"range": [
-1.504920603994155,
302.4965660058451
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": ".2f"
},
"fastqc-median_sequence_length": {
"title": "Median len",
"description": "Median read length",
"suffix": " bp",
"dmin": 0.0,
"dmax": 301,
"hidden": true,
"xaxis": {
"ticksuffix": " bp",
"tickvals": null,
"range": [
-1.5050000000000001,
302.512525
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": null
},
"fastqc-percent_fails": {
"title": "Failed",
"description": "Percentage of modules failed in FastQC report (includes those not plotted here)",
"suffix": "%",
"dmin": 0.0,
"dmax": 100.0,
"hidden": true,
"xaxis": {
"ticksuffix": "%",
"tickvals": null,
"range": [
-0.5,
100.5025
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": ".2f"
},
"fastqc-total_sequences": {
"title": "Seqs",
"description": "Total sequences (millions)",
"suffix": "M",
"dmin": 0.0,
"dmax": 0.103848,
"hidden": false,
"xaxis": {
"ticksuffix": "M",
"tickvals": null,
"range": [
-0.00051924,
0.1043698362
]
},
"show_only_outliers": false,
"show_points": true,
"namespace": "FastQC",
"color": null,
"hoverformat": ".2f"
}
},
"violin_value_by_sample_by_metric": {
"fastqc-percent_duplicates": {
"CHILD11_R1": 70.68875960939124,
"CHILD12_R1": 69.9051357540072,
"CHILD13_R1": 64.71874620337748,
"CHILD14_R1": 68.72708710380992,
"CHILD15_R1": 69.88776517020227,
"CHILD21_R1": 88.05363568118868,
"CHILD22_R1": 87.93472966390648,
"CHILD23_R1": 92.30556416271966,
"CHILD24_R1": 90.46375703282897,
"CHILD25_R1": 92.80390570834297
},
"fastqc-percent_gc": {
"CHILD11_R1": 54.0,
"CHILD12_R1": 54.0,
"CHILD13_R1": 52.0,
"CHILD14_R1": 55.0,
"CHILD15_R1": 53.0,
"CHILD21_R1": 55.0,
"CHILD22_R1": 55.0,
"CHILD23_R1": 52.0,
"CHILD24_R1": 55.0,
"CHILD25_R1": 54.0
},
"fastqc-avg_sequence_length": {
"CHILD11_R1": 300.7987222106794,
"CHILD12_R1": 300.92546380671996,
"CHILD13_R1": 300.6538695176771,
"CHILD14_R1": 300.442340711866,
"CHILD15_R1": 300.6809324124322,
"CHILD21_R1": 300.9464419766509,
"CHILD22_R1": 300.984120798831,
"CHILD23_R1": 300.9438714532336,
"CHILD24_R1": 300.8183536352215,
"CHILD25_R1": 300.9070516524151
},
"fastqc-median_sequence_length": {
"CHILD11_R1": 301,
"CHILD12_R1": 301,
"CHILD13_R1": 301,
"CHILD14_R1": 301,
"CHILD15_R1": 301,
"CHILD21_R1": 301,
"CHILD22_R1": 301,
"CHILD23_R1": 301,
"CHILD24_R1": 301,
"CHILD25_R1": 301
},
"fastqc-percent_fails": {
"CHILD11_R1": 54.54545454545454,
"CHILD12_R1": 54.54545454545454,
"CHILD13_R1": 45.45454545454545,
"CHILD14_R1": 54.54545454545454,
"CHILD15_R1": 54.54545454545454,
"CHILD21_R1": 45.45454545454545,
"CHILD22_R1": 45.45454545454545,
"CHILD23_R1": 45.45454545454545,
"CHILD24_R1": 45.45454545454545,
"CHILD25_R1": 45.45454545454545
},
"fastqc-total_sequences": {
"CHILD11_R1": 0.019252,
"CHILD12_R1": 0.021398999999999998,
"CHILD13_R1": 0.008231,
"CHILD14_R1": 0.021549,
"CHILD15_R1": 0.016215999999999998,
"CHILD21_R1": 0.038631,
"CHILD22_R1": 0.02053,
"CHILD23_R1": 0.090364,
"CHILD24_R1": 0.09153499999999999,
"CHILD25_R1": 0.103848
}
},
"scatter_value_by_sample_by_metric": {
"fastqc-percent_duplicates": {},
"fastqc-percent_gc": {},
"fastqc-avg_sequence_length": {},
"fastqc-median_sequence_length": {},
"fastqc-percent_fails": {},
"fastqc-total_sequences": {}
},
"all_samples": [
"CHILD11_R1",
"CHILD12_R1",
"CHILD13_R1",
"CHILD14_R1",
"CHILD15_R1",
"CHILD21_R1",
"CHILD22_R1",
"CHILD23_R1",
"CHILD24_R1",
"CHILD25_R1"
],
"scatter_trace_params": {
"mode": "markers",
"marker": {
"size": 4,
"color": "#0b79e6"
},
"showlegend": false,
"hovertemplate": "%{text}: %{x}",
"hoverlabel": {
"bgcolor": "white"
}
}
}
],
"pconfig": {
"id": "general_stats_table",
"title": "General Statistics",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"namespace": "",
"save_file": true,
"raw_data_fn": "multiqc_general_stats",
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null
},
"add_log_tab": false,
"add_pct_tab": false,
"l_active": false,
"p_active": false,
"pct_axis_update": {
"ticksuffix": "%",
"hoverformat": ".1f"
},
"axis_controlled_by_switches": [],
"square": false,
"flat": false,
"defer_render": false,
"violin_height": 70,
"extra_height": 63,
"no_violin": false,
"show_table": true,
"show_table_by_default": true,
"n_samples": 10,
"main_table_dt": {
"id": "general_stats_table",
"anchor": "general_stats_table_table",
"pconfig": {
"id": "general_stats_table",
"title": "General Statistics",
"anchor": null,
"table_title": null,
"height": null,
"width": null,
"square": false,
"logswitch": false,
"logswitch_active": false,
"logswitch_label": "Log10",
"cpswitch": true,
"cpswitch_c_active": true,
"cpswitch_counts_label": "Counts",
"cpswitch_percent_label": "Percentages",
"xLog": null,
"yLog": null,
"xlog": false,
"ylog": false,
"data_labels": [],
"xTitle": null,
"yTitle": null,
"xlab": null,
"ylab": null,
"xsuffix": null,
"ysuffix": null,
"tt_suffix": null,
"xLabFormat": null,
"yLabFormat": null,
"xLabelFormat": null,
"yLabelFormat": null,
"xlab_format": null,
"ylab_format": null,
"tt_label": null,
"xDecimals": null,
"yDecimals": null,
"decimalPlaces": null,
"x_decimals": null,
"y_decimals": null,
"tt_decimals": null,
"xmin": null,
"xmax": null,
"ymin": null,
"ymax": null,
"xFloor": null,
"xCeiling": null,
"yFloor": null,
"yCeiling": null,
"x_clipmin": null,
"x_clipmax": null,
"y_clipmin": null,
"y_clipmax": null,
"save_data_file": true,
"showlegend": null,
"xMinRange": null,
"yMinRange": null,
"x_minrange": null,
"y_minrange": null,
"xPlotBands": null,
"yPlotBands": null,
"xPlotLines": null,
"yPlotLines": null,
"x_bands": null,
"y_bands": null,
"x_lines": null,
"y_lines": null,
"namespace": "",
"save_file": true,
"raw_data_fn": "multiqc_general_stats",
"defaultsort": null,
"sortRows": true,
"sort_rows": true,
"only_defined_headers": true,
"col1_header": "Sample Name",
"no_beeswarm": false,
"no_violin": false,
"scale": "GnBu",
"min": null
},
"sections": [
{
"column_by_key": {
"percent_duplicates": {
"rid": "fastqc-percent_duplicates",
"title": "Dups",
"description": "% duplicate reads",
"scale": "RdYlGn-rev",
"hidden": false,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"percent_gc": {
"rid": "fastqc-percent_gc",
"title": "GC",
"description": "Average % GC content",
"scale": "PuRd",
"hidden": false,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"avg_sequence_length": {
"rid": "fastqc-avg_sequence_length",
"title": "Avg len",
"description": "Average read length",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": null,
"dmax": 300.984120798831,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": " bp",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"median_sequence_length": {
"rid": "fastqc-median_sequence_length",
"title": "Median len",
"description": "Median read length",
"scale": "RdYlGn",
"hidden": true,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": null,
"dmax": 301,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": " bp",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"percent_fails": {
"rid": "fastqc-percent_fails",
"title": "Failed",
"description": "Percentage of modules failed in FastQC report (includes those not plotted here)",
"scale": "Reds",
"hidden": true,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": 100.0,
"dmax": 100.0,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "%",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
},
"total_sequences": {
"rid": "fastqc-total_sequences",
"title": "Seqs",
"description": "Total sequences (millions)",
"scale": "Blues",
"hidden": false,
"placement": 1000.0,
"namespace": "FastQC",
"colour": null,
"color": null,
"max": null,
"dmax": 0.103848,
"min": 0.0,
"dmin": 0.0,
"ceiling": null,
"floor": null,
"minRange": null,
"minrange": null,
"shared_key": null,
"tt_decimals": null,
"suffix": "M",
"cond_formatting_colours": [
{
"blue": "#337ab7"
},
{
"lbue": "#5bc0de"
},
{
"pass": "#5cb85c"
},
{
"warn": "#f0ad4e"
},
{
"fail": "#d9534f"
}
],
"cond_formatting_rules": {},
"bgcols": {},
"bars_zero_centrepoint": false
}
},
"rows_by_sgroup": {
"CHILD11_R1": [
{
"sample": "CHILD11_R1",
"raw_data": {
"total_sequences": 0.019252,
"percent_gc": 54.0,
"avg_sequence_length": 300.7987222106794,
"median_sequence_length": 301,
"percent_duplicates": 70.68875960939124,
"percent_fails": 54.54545454545454
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "54.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "70.7",
"percent_fails": "55"
}
}
],
"CHILD12_R1": [
{
"sample": "CHILD12_R1",
"raw_data": {
"total_sequences": 0.021398999999999998,
"percent_gc": 54.0,
"avg_sequence_length": 300.92546380671996,
"median_sequence_length": 301,
"percent_duplicates": 69.9051357540072,
"percent_fails": 54.54545454545454
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "54.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "69.9",
"percent_fails": "55"
}
}
],
"CHILD13_R1": [
{
"sample": "CHILD13_R1",
"raw_data": {
"total_sequences": 0.008231,
"percent_gc": 52.0,
"avg_sequence_length": 300.6538695176771,
"median_sequence_length": 301,
"percent_duplicates": 64.71874620337748,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "52.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "64.7",
"percent_fails": "45"
}
}
],
"CHILD14_R1": [
{
"sample": "CHILD14_R1",
"raw_data": {
"total_sequences": 0.021549,
"percent_gc": 55.0,
"avg_sequence_length": 300.442340711866,
"median_sequence_length": 301,
"percent_duplicates": 68.72708710380992,
"percent_fails": 54.54545454545454
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "55.0",
"avg_sequence_length": "300",
"median_sequence_length": "301",
"percent_duplicates": "68.7",
"percent_fails": "55"
}
}
],
"CHILD15_R1": [
{
"sample": "CHILD15_R1",
"raw_data": {
"total_sequences": 0.016215999999999998,
"percent_gc": 53.0,
"avg_sequence_length": 300.6809324124322,
"median_sequence_length": 301,
"percent_duplicates": 69.88776517020227,
"percent_fails": 54.54545454545454
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "53.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "69.9",
"percent_fails": "55"
}
}
],
"CHILD21_R1": [
{
"sample": "CHILD21_R1",
"raw_data": {
"total_sequences": 0.038631,
"percent_gc": 55.0,
"avg_sequence_length": 300.9464419766509,
"median_sequence_length": 301,
"percent_duplicates": 88.05363568118868,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "55.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "88.1",
"percent_fails": "45"
}
}
],
"CHILD22_R1": [
{
"sample": "CHILD22_R1",
"raw_data": {
"total_sequences": 0.02053,
"percent_gc": 55.0,
"avg_sequence_length": 300.984120798831,
"median_sequence_length": 301,
"percent_duplicates": 87.93472966390648,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.0",
"percent_gc": "55.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "87.9",
"percent_fails": "45"
}
}
],
"CHILD23_R1": [
{
"sample": "CHILD23_R1",
"raw_data": {
"total_sequences": 0.090364,
"percent_gc": 52.0,
"avg_sequence_length": 300.9438714532336,
"median_sequence_length": 301,
"percent_duplicates": 92.30556416271966,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.1",
"percent_gc": "52.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "92.3",
"percent_fails": "45"
}
}
],
"CHILD24_R1": [
{
"sample": "CHILD24_R1",
"raw_data": {
"total_sequences": 0.09153499999999999,
"percent_gc": 55.0,
"avg_sequence_length": 300.8183536352215,
"median_sequence_length": 301,
"percent_duplicates": 90.46375703282897,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.1",
"percent_gc": "55.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "90.5",
"percent_fails": "45"
}
}
],
"CHILD25_R1": [
{
"sample": "CHILD25_R1",
"raw_data": {
"total_sequences": 0.103848,
"percent_gc": 54.0,
"avg_sequence_length": 300.9070516524151,
"median_sequence_length": 301,
"percent_duplicates": 92.80390570834297,
"percent_fails": 45.45454545454545
},
"formatted_data": {
"total_sequences": "0.1",
"percent_gc": "54.0",
"avg_sequence_length": "301",
"median_sequence_length": "301",
"percent_duplicates": "92.8",
"percent_fails": "45"
}
}
]
}
}
],
"headers_in_order": {
"1000.0": [
[
0,
"percent_duplicates"
],
[
0,
"percent_gc"
],
[
0,
"avg_sequence_length"
],
[
0,
"median_sequence_length"
],
[
0,
"percent_fails"
],
[
0,
"total_sequences"
]
]
}
}
}
},
"report_saved_raw_data": {
"multiqc_fastqc": {
"CHILD11_R1": {
"Filename": "CHILD11_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 19252.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "82-301",
"%GC": 54.0,
"total_deduplicated_percentage": 29.311240390608766,
"avg_sequence_length": 300.7987222106794,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "fail",
"per_sequence_quality_scores": "warn",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD12_R1": {
"Filename": "CHILD12_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 21399.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "85-301",
"%GC": 54.0,
"total_deduplicated_percentage": 30.094864245992802,
"avg_sequence_length": 300.92546380671996,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "fail",
"per_sequence_quality_scores": "warn",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD13_R1": {
"Filename": "CHILD13_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 8231.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "71-301",
"%GC": 52.0,
"total_deduplicated_percentage": 35.28125379662252,
"avg_sequence_length": 300.6538695176771,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "fail",
"per_sequence_quality_scores": "warn",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "warn",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD14_R1": {
"Filename": "CHILD14_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 21549.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "81-301",
"%GC": 55.0,
"total_deduplicated_percentage": 31.272912896190082,
"avg_sequence_length": 300.442340711866,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "fail",
"per_sequence_quality_scores": "warn",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD15_R1": {
"Filename": "CHILD15_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 16216.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "73-301",
"%GC": 53.0,
"total_deduplicated_percentage": 30.11223482979773,
"avg_sequence_length": 300.6809324124322,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "fail",
"per_sequence_quality_scores": "warn",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD21_R1": {
"Filename": "CHILD21_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 38631.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "296-301",
"%GC": 55.0,
"total_deduplicated_percentage": 11.946364318811318,
"avg_sequence_length": 300.9464419766509,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "warn",
"per_sequence_quality_scores": "pass",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD22_R1": {
"Filename": "CHILD22_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 20530.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "296-301",
"%GC": 55.0,
"total_deduplicated_percentage": 12.065270336093521,
"avg_sequence_length": 300.984120798831,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "warn",
"per_sequence_quality_scores": "pass",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD23_R1": {
"Filename": "CHILD23_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 90364.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "158-301",
"%GC": 52.0,
"total_deduplicated_percentage": 7.694435837280333,
"avg_sequence_length": 300.9438714532336,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "warn",
"per_sequence_quality_scores": "pass",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD24_R1": {
"Filename": "CHILD24_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 91535.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "295-301",
"%GC": 55.0,
"total_deduplicated_percentage": 9.536242967171027,
"avg_sequence_length": 300.8183536352215,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "warn",
"per_sequence_quality_scores": "pass",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
},
"CHILD25_R1": {
"Filename": "CHILD25_R1.fastq",
"File type": "Conventional base calls",
"Encoding": "Sanger / Illumina 1.9",
"Total Sequences": 103848.0,
"Sequences flagged as poor quality": 0.0,
"Sequence length": "37-301",
"%GC": 54.0,
"total_deduplicated_percentage": 7.196094291657038,
"avg_sequence_length": 300.9070516524151,
"median_sequence_length": 301,
"basic_statistics": "pass",
"per_base_sequence_quality": "fail",
"per_tile_sequence_quality": "warn",
"per_sequence_quality_scores": "pass",
"per_base_sequence_content": "fail",
"per_sequence_gc_content": "fail",
"per_base_n_content": "pass",
"sequence_length_distribution": "warn",
"sequence_duplication_levels": "fail",
"overrepresented_sequences": "fail",
"adapter_content": "pass"
}
},
"multiqc_general_stats": {
"CHILD11_R1": {
"fastqc-percent_duplicates": 70.68875960939124,
"fastqc-percent_gc": 54.0,
"fastqc-avg_sequence_length": 300.7987222106794,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 54.54545454545454,
"fastqc-total_sequences": 0.019252
},
"CHILD12_R1": {
"fastqc-percent_duplicates": 69.9051357540072,
"fastqc-percent_gc": 54.0,
"fastqc-avg_sequence_length": 300.92546380671996,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 54.54545454545454,
"fastqc-total_sequences": 0.021398999999999998
},
"CHILD13_R1": {
"fastqc-percent_duplicates": 64.71874620337748,
"fastqc-percent_gc": 52.0,
"fastqc-avg_sequence_length": 300.6538695176771,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.008231
},
"CHILD14_R1": {
"fastqc-percent_duplicates": 68.72708710380992,
"fastqc-percent_gc": 55.0,
"fastqc-avg_sequence_length": 300.442340711866,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 54.54545454545454,
"fastqc-total_sequences": 0.021549
},
"CHILD15_R1": {
"fastqc-percent_duplicates": 69.88776517020227,
"fastqc-percent_gc": 53.0,
"fastqc-avg_sequence_length": 300.6809324124322,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 54.54545454545454,
"fastqc-total_sequences": 0.016215999999999998
},
"CHILD21_R1": {
"fastqc-percent_duplicates": 88.05363568118868,
"fastqc-percent_gc": 55.0,
"fastqc-avg_sequence_length": 300.9464419766509,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.038631
},
"CHILD22_R1": {
"fastqc-percent_duplicates": 87.93472966390648,
"fastqc-percent_gc": 55.0,
"fastqc-avg_sequence_length": 300.984120798831,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.02053
},
"CHILD23_R1": {
"fastqc-percent_duplicates": 92.30556416271966,
"fastqc-percent_gc": 52.0,
"fastqc-avg_sequence_length": 300.9438714532336,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.090364
},
"CHILD24_R1": {
"fastqc-percent_duplicates": 90.46375703282897,
"fastqc-percent_gc": 55.0,
"fastqc-avg_sequence_length": 300.8183536352215,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.09153499999999999
},
"CHILD25_R1": {
"fastqc-percent_duplicates": 92.80390570834297,
"fastqc-percent_gc": 54.0,
"fastqc-avg_sequence_length": 300.9070516524151,
"fastqc-median_sequence_length": 301,
"fastqc-percent_fails": 45.45454545454545,
"fastqc-total_sequences": 0.103848
}
}
},
"config_analysis_dir_abs": [
"/data/MicrobiomaAraraquara/Children/output/fastqc/pre/R1.txt"
],
"config_analysis_dir": [
"/data/MicrobiomaAraraquara/Children/output/fastqc/pre/R1.txt"
],
"config_creation_date": "2024-11-01, 18:42 -03",
"config_git_hash": null,
"config_intro_text": null,
"config_report_comment": null,
"config_report_header_info": null,
"config_script_path": "/usr/local/bioinfo/anaconda3/lib/python3.9/site-packages/multiqc",
"config_short_version": "1.25.1",
"config_subtitle": null,
"config_title": "Pre-processing reads (R1)",
"config_version": "1.25.1",
"config_output_dir": "/srv/data/MicrobiomaAraraquara/Children/output/fastqc/pre"
}