Sample Filename File type Encoding Total Sequences Sequences flagged as poor quality Sequence length %GC total_deduplicated_percentage avg_sequence_length median_sequence_length basic_statistics per_base_sequence_quality per_tile_sequence_quality per_sequence_quality_scores per_base_sequence_content per_sequence_gc_content per_base_n_content sequence_length_distribution sequence_duplication_levels overrepresented_sequences adapter_content CHILD11_cleaned_R2 CHILD11_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 16176.0 0.0 15-289 52.0 52.23170128585559 209.13897131552918 214 pass fail fail warn fail warn pass warn warn warn pass CHILD12_cleaned_R2 CHILD12_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 17975.0 0.0 15-300 52.0 51.05980528511822 209.87924895688457 214 pass fail fail warn fail fail pass warn warn warn pass CHILD13_cleaned_R2 CHILD13_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 6868.0 0.0 15-300 50.0 52.97029702970298 217.29353523587653 224 pass fail fail warn fail warn pass warn warn fail pass CHILD14_cleaned_R2 CHILD14_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 18297.0 0.0 15-300 52.0 47.13340984860906 209.28460949882495 204 pass fail fail warn fail fail pass warn fail fail pass CHILD15_cleaned_R2 CHILD15_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 13774.0 0.0 15-301 51.0 50.68970524175984 213.6648395527806 214 pass fail fail warn fail warn pass warn warn fail pass CHILD21_cleaned_R2 CHILD21_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 1719.0 0.0 15-300 53.0 97.96393251890633 19.116637579988364 14 pass fail fail fail fail pass pass warn pass warn pass CHILD22_cleaned_R2 CHILD22_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 719.0 0.0 15-105 57.0 99.58275382475661 20.213490959666203 16 pass fail fail fail fail pass pass warn pass warn pass CHILD23_cleaned_R2 CHILD23_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 2702.0 0.0 15-300 52.0 98.40858623242042 18.96558105107328 14 pass fail fail fail fail pass pass warn pass warn pass CHILD24_cleaned_R2 CHILD24_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 4219.0 0.0 15-91 57.0 96.25503673856363 19.67705617444892 16 pass fail fail fail fail pass pass warn pass warn pass CHILD25_cleaned_R2 CHILD25_cleaned_R2.fastq Conventional base calls Sanger / Illumina 1.9 4100.0 0.0 15-98 55.0 97.41463414634146 19.506829268292684 16 pass fail fail fail fail pass pass warn pass warn pass