Index of /children_output/dada2

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[IMG]GammaDivPlot_PD.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_PD.svg2026-06-05 19:02 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_PD.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_rarity_rare_abundance.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_rarity_rare_abundance.svg2026-06-05 19:02 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_rarity_rare_abundance.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_rarity_low_abundance.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_rarity_low_abundance.svg2026-06-05 19:02 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_rarity_low_abundance.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_rarity_log_modulo_skewness.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_rarity_log_modulo_skewness.svg2026-06-05 19:02 8.9K 
[IMG]AlphaDivPlot_GROUP_CHILD_rarity_log_modulo_skewness.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_gini.svg2026-06-05 19:02 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_gini.svg2026-06-05 19:02 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_gini.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_core_abundance.svg2026-06-05 19:02 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_core_abundance.svg2026-06-05 19:02 7.9K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_core_abundance.svg2026-06-05 19:02 36K 
[IMG]GammaDivPlot_dominance_simpson.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_simpson.svg2026-06-05 19:02 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_simpson.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_relative.svg2026-06-05 19:02 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_relative.svg2026-06-05 19:02 9.0K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_relative.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_absolute.svg2026-06-05 19:02 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_absolute.svg2026-06-05 19:02 8.4K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_absolute.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_dmn.svg2026-06-05 19:02 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_dmn.svg2026-06-05 19:02 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_dmn.svg2026-06-05 19:02 35K 
[IMG]GammaDivPlot_dominance_dbp.svg2026-06-05 19:01 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_dominance_dbp.svg2026-06-05 19:01 8.9K 
[IMG]AlphaDivPlot_GROUP_CHILD_dominance_dbp.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_evenness_bulla.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_evenness_bulla.svg2026-06-05 19:01 8.4K 
[IMG]AlphaDivPlot_GROUP_CHILD_evenness_bulla.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_evenness_evar.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_evenness_evar.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_evenness_evar.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_evenness_simpson.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_evenness_simpson.svg2026-06-05 19:01 8.4K 
[IMG]AlphaDivPlot_GROUP_CHILD_evenness_simpson.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_evenness_pielou.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_evenness_pielou.svg2026-06-05 19:01 8.4K 
[IMG]AlphaDivPlot_GROUP_CHILD_evenness_pielou.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_evenness_camargo.svg2026-06-05 19:01 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_evenness_camargo.svg2026-06-05 19:01 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_evenness_camargo.svg2026-06-05 19:01 34K 
[IMG]GammaDivPlot_diversity_coverage.svg2026-06-05 19:01 17K 
[IMG]AlphaDivPlot_CHILD_GROUP_diversity_coverage.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_diversity_coverage.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_diversity_fisher.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_diversity_fisher.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_diversity_fisher.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_diversity_shannon.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_diversity_shannon.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_diversity_shannon.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_diversity_gini_simpson.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_diversity_gini_simpson.svg2026-06-05 19:01 8.7K 
[IMG]AlphaDivPlot_GROUP_CHILD_diversity_gini_simpson.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_diversity_inverse_simpson.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_diversity_inverse_simpson.svg2026-06-05 19:01 8.4K 
[IMG]AlphaDivPlot_GROUP_CHILD_diversity_inverse_simpson.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_chao1.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_chao1.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_chao1.svg2026-06-05 19:01 35K 
[IMG]GammaDivPlot_observed.svg2026-06-05 19:01 18K 
[IMG]AlphaDivPlot_CHILD_GROUP_observed.svg2026-06-05 19:01 8.2K 
[IMG]AlphaDivPlot_GROUP_CHILD_observed.svg2026-06-05 19:01 35K 
[ ]Analysis_Amplicon_RDP_4.RData2026-06-05 18:57 183M 
[IMG]aHeatmap.svg2026-06-05 18:56 367K 
[IMG]Heatmap_DA_DESeq2.svg2026-06-05 18:55 110K 
[ ]Differential_Abundance.xlsx2026-06-05 18:55 11K 
[IMG]PCoA_unwei_unifrac_CHILD.svg2026-06-05 18:55 8.6K 
[IMG]PCoA_wei_unifrac_CHILD.svg2026-06-05 18:55 8.3K 
[IMG]PCoA_jaccard_CHILD.svg2026-06-05 18:55 8.4K 
[IMG]PCoA_bray_CHILD.svg2026-06-05 18:55 8.8K 
[IMG]PCoA_unwei_unifrac_GROUP.svg2026-06-05 18:55 7.5K 
[IMG]PCoA_wei_unifrac_GROUP.svg2026-06-05 18:55 7.1K 
[IMG]PCoA_jaccard_GROUP.svg2026-06-05 18:55 7.2K 
[IMG]PCoA_bray_GROUP.svg2026-06-05 18:55 7.6K 
[IMG]Hill_profile_gamma.svg2026-06-05 18:54 33K 
[IMG]Hill_profile_alpha_CHILD.svg2026-06-05 18:54 45K 
[IMG]Hill_profile_alpha_GROUP.svg2026-06-05 18:54 39K 
[ ]diversity.xlsx2026-06-05 18:38 7.6K 
[IMG]CompoPlot_genus.svg2026-06-05 18:38 66K 
[IMG]CompoPlot_phylum.svg2026-06-05 18:38 52K 
[IMG]UpSet_genus.svg2026-06-05 18:37 62K 
[IMG]UpSet_asvs.svg2026-06-05 18:37 58K 
[IMG]aHeatmap_shared_otus_rarefied.svg2026-06-05 18:25 35K 
[IMG]aHeatmap_shared_otus_original.svg2026-06-05 18:25 35K 
[ ]Shared-ASVs.xlsx2026-06-05 18:25 8.1K 
[IMG]Rarecurve_GROUP_SAMPLE_DADA2_rarefied.svg2026-06-05 18:16 43K 
[IMG]Rarecurve_GROUP_DADA2_rarefied.svg2026-06-05 18:16 118K 
[IMG]Rarecurve_DADA2_rarefied.svg2026-06-05 18:16 33K 
[IMG]Rarecurve_GROUP_SAMPLE_DADA2.svg2026-06-05 18:16 41K 
[IMG]Rarecurve_GROUP_DADA2.svg2026-06-05 18:16 299K 
[IMG]Rarecurve_DADA2.svg2026-06-05 18:16 43K 
[ ]MA_tree.nwk2026-06-05 18:10 12K 
[TXT]MA_taxonomy.txt2026-06-05 18:10 43K 
[TXT]MA_metadata.txt2026-06-05 18:10 627  
[TXT]MA_counts.txt2026-06-05 18:10 14K 
[DIR]info/2026-06-05 18:03 -  
[ ]master.xlsx2026-06-05 18:03 34K 
[ ]ContaminantFree_ASVs.fa2026-06-05 18:01 72K 
[ ]ASVs.fa2026-06-03 19:23 72K 
[IMG]Amplicons_Quality_Score_DADA2_learnErrors_2.svg2026-06-03 19:23 136K 
[IMG]Amplicons_Quality_Score_DADA2_learnErrors_1.svg2026-06-03 19:23 136K 
[IMG]Amplicons_Quality_Score_DADA2_filterAndTrim_sample.svg2026-06-03 19:20 942K 
[IMG]Amplicons_Quality_Score_DADA2_filterAndTrim.svg2026-06-03 19:20 3.6M 
[DIR]filterAndTrim/2026-06-03 19:20 -  
[IMG]Amplicons_Quality_Score_pre_DADA2_sample.svg2026-06-03 19:19 1.2M 
[IMG]Amplicons_Quality_Score_pre_DADA2.svg2026-06-03 19:19 6.0M 
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