Sample	Filename	File type	Encoding	Total Sequences	Sequences flagged as poor quality	Sequence length	%GC	total_deduplicated_percentage	avg_sequence_length	median_sequence_length	basic_statistics	per_base_sequence_quality	per_tile_sequence_quality	per_sequence_quality_scores	per_base_sequence_content	per_sequence_gc_content	per_base_n_content	sequence_length_distribution	sequence_duplication_levels	overrepresented_sequences	adapter_content
CAFS1_cleaned_R1	CAFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	162608.0	0.0	38-301	54.0	4.223039456853291	300.98955155957884	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
CAFS2_cleaned_R1	CAFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	150374.0	0.0	225-301	53.0	4.4748427254711585	300.49757936877387	300	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
CAMS1_cleaned_R1	CAMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	145755.0	0.0	100-301	53.0	4.470515591231862	300.9908682377963	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
CAMS2_cleaned_R1	CAMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	165995.0	0.0	69-301	53.0	4.1368715925178465	300.989439440947	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
CCFS1_cleaned_R1	CCFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	216034.0	0.0	16-301	53.0	6.052750955868058	300.32038243980116	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CCFS2_cleaned_R1	CCFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	202402.0	0.0	17-301	53.0	6.522662819537356	300.3105947569688	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CCMS1_cleaned_R1	CCMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	209360.0	0.0	15-301	53.0	6.202235384027512	300.2981013565151	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CCMS2_cleaned_R1	CCMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	196384.0	0.0	15-301	53.0	6.272914290369888	300.342308945739	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CPFS1_cleaned_R1	CPFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	149186.0	0.0	16-301	53.0	5.1023554489027125	300.17415508157603	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CPFS2_cleaned_R1	CPFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	178410.0	0.0	15-301	53.0	6.810156381368758	300.23763241970744	301	pass	pass	warn	pass	fail	warn	pass	warn	fail	fail	pass
CPMS1_cleaned_R1	CPMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	225307.0	0.0	16-301	53.0	6.265229220574593	300.11834741042225	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CPMS2_cleaned_R1	CPMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	203877.0	0.0	16-301	53.0	6.1865732770248725	300.2412802817385	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CVFS1_cleaned_R1	CVFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	218806.0	0.0	16-301	53.0	6.220121934499054	300.3604928566858	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CVFS2_cleaned_R1	CVFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	206088.0	0.0	15-301	53.0	6.182795698924731	300.35288566049456	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CVMS1_cleaned_R1	CVMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	182802.0	0.0	16-301	52.0	5.973129396833732	300.3028796183849	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
CVMS2_cleaned_R1	CVMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	227641.0	0.0	16-301	52.0	5.885143713127248	300.3267249748508	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DAFS1_cleaned_R1	DAFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	89069.0	0.0	76-301	54.0	5.466548406291751	300.8614669525873	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
DAFS2_cleaned_R1	DAFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	37221.0	0.0	37-301	53.0	8.535504150882566	300.6720802772628	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
DAMS1_cleaned_R1	DAMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	63025.0	0.0	76-301	50.0	4.78222927409758	300.83701705672354	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
DAMS2_cleaned_R1	DAMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	79949.0	0.0	44-301	50.0	3.467210346595955	300.8179276788953	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
DCFS1_cleaned_R1	DCFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	122264.0	0.0	25-301	51.0	5.743309559641432	299.749059412419	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DCFS2_cleaned_R1	DCFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	71052.0	0.0	36-301	51.0	8.17429488262118	298.7533637336036	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DCMS1_cleaned_R1	DCMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	240754.0	0.0	27-301	52.0	4.721416881962502	300.06223780290253	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DCMS2_cleaned_R1	DCMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	93887.0	0.0	26-301	51.0	7.921224450669421	298.6533811922843	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DPFS1_cleaned_R1	DPFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	141413.0	0.0	16-301	52.0	5.392007806920156	300.09978219824205	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DPFS2_cleaned_R1	DPFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	131642.0	0.0	27-301	52.0	6.390057884261862	299.1043777821668	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DPMS1_cleaned_R1	DPMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	81853.0	0.0	26-301	52.0	8.355222166566895	300.3391445640355	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DPMS2_cleaned_R1	DPMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	86511.0	0.0	23-301	51.0	8.627804556645975	299.85061437273873	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DVFS1_cleaned_R1	DVFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	71712.0	0.0	28-301	51.0	8.362617135207497	300.053707887104	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DVFS2_cleaned_R1	DVFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	101123.0	0.0	21-301	51.0	7.537355497760154	299.5304184013528	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DVMS1_cleaned_R1	DVMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	165240.0	0.0	16-301	52.0	7.659767610748003	299.95823953038007	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
DVMS2_cleaned_R1	DVMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	160495.0	0.0	24-301	52.0	7.13230941773887	299.96482756472165	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IAFS1_cleaned_R1	IAFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	162981.0	0.0	51-301	54.0	2.0345929893668586	300.9867101073131	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
IAFS2_cleaned_R1	IAFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	126693.0	0.0	51-301	54.0	2.2519002628400937	300.98339292620744	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
IAMS1_cleaned_R1	IAMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	150339.0	0.0	51-301	54.0	2.304126008554001	300.9773644895869	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
IAMS2_cleaned_R1	IAMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	150412.0	0.0	51-301	54.0	3.6473153737733695	300.977468553041	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
ICFS1_cleaned_R1	ICFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	139294.0	0.0	16-301	52.0	6.787083435036685	300.1785755308915	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
ICFS2_cleaned_R1	ICFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	172200.0	0.0	26-301	53.0	7.343205574912892	300.2732984901278	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
ICMS1_cleaned_R1	ICMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	194122.0	0.0	15-301	53.0	4.034061054388478	300.25597819927674	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
ICMS2_cleaned_R1	ICMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	125217.0	0.0	35-301	54.0	4.891508341519122	300.30588498366836	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IPFS1_cleaned_R1	IPFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	160350.0	0.0	17-301	52.0	4.155908949173683	300.3033021515435	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IPFS2_cleaned_R1	IPFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	223737.0	0.0	16-301	53.0	6.150524946700814	300.2560037007737	301	pass	pass	warn	pass	fail	warn	pass	warn	fail	fail	pass
IPMS1_cleaned_R1	IPMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	344508.0	0.0	16-301	54.0	3.541862598256064	300.3127039139875	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IPMS2_cleaned_R1	IPMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	243196.0	0.0	15-301	53.0	4.824503692494942	300.2448868402441	301	pass	pass	warn	pass	fail	warn	pass	warn	fail	fail	pass
IVFS1_cleaned_R1	IVFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	228051.0	0.0	16-301	54.0	3.2698826139766983	300.262739474942	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IVFS2_cleaned_R1	IVFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	126977.0	0.0	17-301	51.0	3.663655622671822	300.3029091882782	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IVMS1_cleaned_R1	IVMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	155447.0	0.0	16-301	52.0	5.785251564842036	300.02352248676397	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
IVMS2_cleaned_R1	IVMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	109319.0	0.0	16-301	52.0	4.784163777568401	300.3216138091274	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JAFS1_cleaned_R1	JAFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	131141.0	0.0	38-301	53.0	3.6510320952257493	300.9459093647296	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
JAFS2_cleaned_R1	JAFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	83508.0	0.0	76-301	53.0	4.2882119078411645	300.94860372658906	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
JAMS1_cleaned_R1	JAMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	161997.0	0.0	86-301	50.0	1.8741087797922182	300.9681352123805	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
JAMS2_cleaned_R1	JAMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	146335.0	0.0	81-301	50.0	3.0232001913417843	300.9482283800868	301	pass	pass	pass	pass	fail	fail	pass	warn	fail	fail	pass
JCFS1_cleaned_R1	JCFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	187605.0	0.0	16-301	51.0	2.8448069081314467	300.44353828522696	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JCFS2_cleaned_R1	JCFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	151667.0	0.0	27-301	51.0	3.247904949659451	300.3130905206802	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JCMS1_cleaned_R1	JCMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	160867.0	0.0	24-301	52.0	4.3874753678504606	300.3490119166765	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JCMS2_cleaned_R1	JCMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	127003.0	0.0	16-301	52.0	5.904584931064621	300.2620134957442	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JPFS1_cleaned_R1	JPFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	232873.0	0.0	22-301	51.0	2.43609177534536	300.4124479866708	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JPFS2_cleaned_R1	JPFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	201164.0	0.0	23-301	51.0	2.991091845459426	300.3828791433855	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JPMS1_cleaned_R1	JPMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	210585.0	0.0	16-301	51.0	4.815157774770283	300.29685400194694	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JPMS2_cleaned_R1	JPMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	133793.0	0.0	27-301	51.0	5.501782604471086	300.31927305613897	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JVFS1_cleaned_R1	JVFS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	109392.0	0.0	22-301	51.0	4.333040807371654	300.24526930671345	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JVFS2_cleaned_R1	JVFS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	149301.0	0.0	16-301	54.0	4.466815359575622	300.3234171237969	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JVMS1_cleaned_R1	JVMS1_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	346075.0	0.0	16-301	52.0	3.372968287220978	300.28046666185077	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass
JVMS2_cleaned_R1	JVMS2_cleaned_R1.fastq	Conventional base calls	Sanger / Illumina 1.9	116755.0	0.0	16-301	52.0	5.77362853839236	300.22512954477327	301	pass	pass	warn	pass	fail	fail	pass	warn	fail	fail	pass