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"CGTGG":6757, "CGCAA":6738, "CGCAT":337531, "CGCAC":24407, "CGCAG":6913, "CGCTA":619963, "CGCTT":614166, "CGCTC":311901, "CGCTG":17258, "CGCCA":337729, "CGCCT":657949, "CGCCC":302967, "CGCCG":28656, "CGCGA":2578, "CGCGT":5027, "CGCGC":17864, "CGCGG":290155, "CGGAA":17595, "CGGAT":37807, "CGGAC":282956, "CGGAG":9396, "CGGTA":8369, "CGGTT":313644, "CGGTC":12147, "CGGTG":5267, "CGGCA":12404, "CGGCT":299718, "CGGCC":22478, "CGGCG":21398, "CGGGA":11043, "CGGGT":128269, "CGGGC":17739, "CGGGG":56392, "GAAAA":286732, "GAAAT":11737, "GAAAC":4062, "GAAAG":5906, "GAATA":3637, "GAATT":44448, "GAATC":1499, "GAATG":2798, "GAACA":6849, "GAACT":9444, "GAACC":5884, "GAACG":3998, "GAAGA":4345, "GAAGT":7249, "GAAGC":3317, "GAAGG":6388, "GATAA":33713, "GATAT":6729, "GATAC":5538, "GATAG":5268, "GATTA":6467, "GATTT":19770, "GATTC":5393, "GATTG":2803, "GATCA":1694, "GATCT":14730, "GATCC":6037, "GATCG":2217, "GATGA":713, "GATGT":4247, "GATGC":282622, "GATGG":10224, "GACAA":277739, "GACAT":5152, "GACAC":6006, "GACAG":8147, "GACTA":343012, "GACTT":307931, "GACTC":6488, "GACTG":3966, "GACCA":295846, "GACCT":9794, "GACCC":6249, "GACCG":4871, "GACGA":3269, "GACGT":8419, "GACGC":11182, "GACGG":11541, "GAGAA":2994, "GAGAT":1819, "GAGAC":4527, "GAGAG":292397, "GAGTA":1960, "GAGTT":310435, "GAGTC":2422, "GAGTG":11916, "GAGCA":6989, "GAGCT":5948, "GAGCC":632348, "GAGCG":4127, "GAGGA":579, "GAGGT":2120, "GAGGC":5693, "GAGGG":275744, "GTAAA":22103, "GTAAT":15127, "GTAAC":2219, "GTAAG":15983, "GTATA":6232, "GTATT":301725, "GTATC":344724, "GTATG":1577, "GTACA":2438, "GTACT":20847, "GTACC":5306, "GTACG":2820, "GTAGA":4241, "GTAGT":274601, "GTAGC":6475, "GTAGG":9640, "GTTAA":296584, "GTTAT":7866, "GTTAC":32445, "GTTAG":281546, "GTTTA":12330, "GTTTT":26075, "GTTTC":328963, "GTTTG":51857, "GTTCA":12264, "GTTCT":305358, "GTTCC":606903, "GTTCG":298647, "GTTGA":39920, "GTTGT":6938, "GTTGC":311955, "GTTGG":16197, "GTCAA":3556, "GTCAT":3247, "GTCAC":4149, "GTCAG":338748, "GTCTA":14200, "GTCTT":22227, "GTCTC":13870, "GTCTG":3681, "GTCCA":34922, "GTCCT":4673, "GTCCC":12742, "GTCCG":4220, "GTCGA":919, "GTCGT":10871, "GTCGC":15832, "GTCGG":12080, "GTGAA":1232, "GTGAT":1179, "GTGAC":3736, "GTGAG":1970, "GTGTA":889, "GTGTT":335493, "GTGTC":24227, "GTGTG":546, "GTGCA":2754, "GTGCT":24980, "GTGCC":16922, "GTGCG":2553, "GTGGA":2353, "GTGGT":4917, "GTGGC":17721, "GTGGG":4186, "GCAAA":2577, "GCAAT":14085, "GCAAC":7985, "GCAAG":7572, "GCATA":5612, "GCATT":337898, "GCATC":14730, "GCATG":5714, "GCACA":15769, "GCACT":318552, "GCACC":35172, "GCACG":273785, "GCAGA":300988, "GCAGT":303423, "GCAGC":8687, "GCAGG":17740, "GCTAA":2914, "GCTAT":6709, "GCTAC":626146, "GCTAG":7222, "GCTTA":16787, "GCTTT":920423, "GCTTC":18313, "GCTTG":297524, "GCTCA":3891, "GCTCT":12295, "GCTCC":85293, "GCTCG":282359, "GCTGA":3398, "GCTGT":5980, "GCTGC":298743, "GCTGG":311606, "GCCAA":13455, "GCCAT":6354, "GCCAC":612758, "GCCAG":10684, "GCCTA":24925, "GCCTT":341308, "GCCTC":343930, "GCCTG":302811, "GCCCA":313618, 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"GGCGT":5251, "GGCGC":4540, "GGCGG":15447, "GGGAA":8429, "GGGAT":14234, "GGGAC":10528, "GGGAG":2967, "GGGTA":341045, "GGGTT":39157, "GGGTC":1952, "GGGTG":15588, "GGGCA":3303, "GGGCT":298578, "GGGCC":6584, "GGGCG":2311, "GGGGA":2674, "GGGGT":134126, "GGGGC":10180, "GGGGG":100676 }, "overrepresented_sequences": { } }, "command": "fastp -i /data/MicrobiomaFrangos/input/JVMS1_R1.fastq -I /data/MicrobiomaFrangos/input/JVMS1_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/JVMS1_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/JVMS1_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/JVMS1_R1.html --json /data/MicrobiomaFrangos/output/fastp/JVMS1_R1.json " }