Read1 before filtering:
total reads: 188244
total bases: 56649325
Q20 bases: 55748260(98.4094%)
Q30 bases: 53541507(94.5139%)

Read2 before filtering:
total reads: 188244
total bases: 56472463
Q20 bases: 52897666(93.6698%)
Q30 bases: 44693092(79.1414%)

Read1 after filtering:
total reads: 187605
total bases: 56369159
Q20 bases: 55528023(98.5078%)
Q30 bases: 53428337(94.7829%)

Read2 after filtering:
total reads: 187605
total bases: 55787816
Q20 bases: 52490931(94.0903%)
Q30 bases: 44673208(80.077%)

Filtering result:
reads passed filter: 375210
reads failed due to low quality: 700
reads failed due to too many N: 0
reads failed due to too short: 578

Duplication rate: 12.5486%

Insert size peak (evaluated by paired-end reads): 465

JSON report: /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.json
HTML report: /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.html

fastp -i /data/MicrobiomaFrangos/input/JCFS1_R1.fastq -I /data/MicrobiomaFrangos/input/JCFS1_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/JCFS1_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/JCFS1_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.html --json /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.json 
fastp v0.23.2, time used: 6 seconds