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"GAAAA":2260, "GAAAT":2061, "GAAAC":5253, "GAAAG":370870, "GAATA":177848, "GAATT":5634, "GAATC":182936, "GAATG":2955, "GAACA":2953, "GAACT":176180, "GAACC":1535, "GAACG":4669, "GAAGA":545238, "GAAGT":4545, "GAAGC":4654, "GAAGG":369824, "GATAA":1872, "GATAT":1401, "GATAC":1552, "GATAG":179339, "GATTA":1790, "GATTT":182674, "GATTC":421, "GATTG":2276, "GATCA":970, "GATCT":1904, "GATCC":341, "GATCG":177619, "GATGA":2440, "GATGT":181965, "GATGC":3150, "GATGG":184588, "GACAA":822, "GACAT":119, "GACAC":883, "GACAG":3029, "GACTA":1081, "GACTT":1010, "GACTC":333, "GACTG":3070, "GACCA":628, "GACCT":1174, "GACCC":343, "GACCG":1659, "GACGA":4218, "GACGT":1308, "GACGC":179059, "GACGG":186455, "GAGAA":10233, "GAGAT":321, "GAGAC":383, "GAGAG":7304, "GAGTA":6198, "GAGTT":568, "GAGTC":2589, "GAGTG":188024, "GAGCA":184527, "GAGCT":2051, "GAGCC":1866, "GAGCG":183626, "GAGGA":181678, "GAGGT":180583, "GAGGC":44011, "GAGGG":3350, "GTAAA":367060, "GTAAT":362247, "GTAAC":184501, "GTAAG":6650, "GTATA":2142, 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"total_reads": 187605, "total_bases": 56369159, "q20_bases": 55528023, "q30_bases": 53428337, "total_cycles": 301, "quality_curves": { 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"CGGAT":7717, "CGGAC":165592, "CGGAG":5003, "CGGTA":2396, "CGGTT":192554, "CGGTC":5837, "CGGTG":2083, "CGGCA":3448, "CGGCT":161556, "CGGCC":7170, "CGGCG":9083, "CGGGA":1809, "CGGGT":66761, "CGGGC":6505, "CGGGG":25477, "GAAAA":173384, "GAAAT":1652, "GAAAC":1475, "GAAAG":1025, "GAATA":1529, "GAATT":5184, "GAATC":547, "GAATG":143, "GAACA":1922, "GAACT":1180, "GAACC":2908, "GAACG":1708, "GAAGA":1400, "GAAGT":2718, "GAAGC":1085, "GAAGG":5724, "GATAA":5802, "GATAT":794, "GATAC":841, "GATAG":1758, "GATTA":1272, "GATTT":2572, "GATTC":2041, "GATTG":774, "GATCA":828, "GATCT":1574, "GATCC":2544, "GATCG":878, "GATGA":404, "GATGT":718, "GATGC":174643, "GATGG":5397, "GACAA":164391, "GACAT":2857, "GACAC":2880, "GACAG":5831, "GACTA":185402, "GACTT":173444, "GACTC":2350, "GACTG":1170, "GACCA":180491, "GACCT":5423, "GACCC":1668, "GACCG":1319, "GACGA":2021, "GACGT":4374, "GACGC":2472, "GACGG":2563, "GAGAA":1537, "GAGAT":792, "GAGAC":2529, "GAGAG":175600, "GAGTA":933, "GAGTT":186734, "GAGTC":1382, "GAGTG":2640, "GAGCA":693, "GAGCT":2530, "GAGCC":360355, "GAGCG":1239, "GAGGA":242, "GAGGT":783, "GAGGC":3146, "GAGGG":167892, "GTAAA":3303, "GTAAT":3059, "GTAAC":785, "GTAAG":2527, "GTATA":2505, "GTATT":164164, "GTATC":185179, "GTATG":738, "GTACA":962, "GTACT":5727, "GTACC":2050, "GTACG":1545, "GTAGA":1773, "GTAGT":148674, "GTAGC":2746, "GTAGG":2168, "GTTAA":174832, "GTTAT":2911, "GTTAC":9361, "GTTAG":152145, "GTTTA":5638, "GTTTT":4277, "GTTTC":183550, "GTTTG":9795, "GTTCA":4731, "GTTCT":181429, "GTTCC":354583, "GTTCG":183834, "GTTGA":5076, "GTTGT":3274, "GTTGC":190178, "GTTGG":2927, "GTCAA":1697, "GTCAT":420, "GTCAC":1374, "GTCAG":183927, "GTCTA":1269, "GTCTT":6506, "GTCTC":2719, "GTCTG":1073, "GTCCA":2815, "GTCCT":5352, "GTCCC":1965, "GTCCG":1501, "GTCGA":468, "GTCGT":5970, "GTCGC":8664, "GTCGG":2436, "GTGAA":204, "GTGAT":398, "GTGAC":221, "GTGAG":901, "GTGTA":442, "GTGTT":182681, "GTGTC":3366, "GTGTG":290, "GTGCA":1120, "GTGCT":9123, "GTGCC":3137, "GTGCG":700, "GTGGA":951, "GTGGT":2239, "GTGGC":9998, "GTGGG":1359, "GCAAA":883, "GCAAT":4808, "GCAAC":6066, "GCAAG":2634, "GCATA":1185, "GCATT":182352, "GCATC":2890, "GCATG":2945, "GCACA":5190, "GCACT":182544, "GCACC":10663, "GCACG":151429, "GCAGA":181221, "GCAGT":169929, "GCAGC":3729, "GCAGG":5537, "GCTAA":1217, "GCTAT":1929, "GCTAC":362233, "GCTAG":3225, "GCTTA":3689, "GCTTT":530646, "GCTTC":8715, "GCTTG":161742, "GCTCA":1701, "GCTCT":4648, "GCTCC":11102, "GCTCG":168791, "GCTGA":1798, "GCTGT":2007, "GCTGC":158947, "GCTGG":168212, "GCCAA":6560, "GCCAT":1544, "GCCAC":349866, "GCCAG":3971, "GCCTA":3175, "GCCTT":186408, "GCCTC":188285, "GCCTG":175028, "GCCCA":171076, "GCCCT":8975, "GCCCC":13835, "GCCCG":11643, "GCCGA":172095, "GCCGT":4491, "GCCGC":191404, "GCCGG":3614, "GCGAA":656, "GCGAT":728, "GCGAC":2152, "GCGAG":1542, "GCGTA":1330, "GCGTT":3237, "GCGTC":182133, "GCGTG":1267, "GCGCA":2722, "GCGCT":165670, "GCGCC":6161, "GCGCG":2962, "GCGGA":3290, "GCGGT":6050, "GCGGC":151901, "GCGGG":12346, "GGAAA":5072, "GGAAT":1974, "GGAAC":1589, "GGAAG":416, "GGATA":5171, "GGATT":3194, "GGATC":320, "GGATG":1247, "GGACA":163240, "GGACT":4886, "GGACC":2320, "GGACG":4317, "GGAGA":1721, "GGAGT":185102, "GGAGC":1886, "GGAGG":1328, "GGTAA":1184, "GGTAT":185226, "GGTAC":1434, "GGTAG":5029, "GGTTA":175640, "GGTTT":12326, "GGTTC":2828, "GGTTG":13524, "GGTCA":1592, "GGTCT":840, "GGTCC":658, "GGTCG":5298, "GGTGA":398, "GGTGT":182307, "GGTGC":8152, "GGTGG":11328, "GGCAA":3199, "GGCAT":1549, "GGCAC":157328, "GGCAG":5287, "GGCTA":2220, "GGCTT":179816, "GGCTC":8460, "GGCTG":159881, "GGCCA":5410, "GGCCT":3572, "GGCCC":9759, "GGCCG":3388, "GGCGA":1986, "GGCGT":2615, "GGCGC":2677, "GGCGG":8301, "GGGAA":550, "GGGAT":1645, "GGGAC":4852, "GGGAG":1524, "GGGTA":184453, "GGGTT":7814, "GGGTC":1107, "GGGTG":8300, "GGGCA":1815, "GGGCT":177192, "GGGCC":3053, "GGGCG":1226, "GGGGA":412, "GGGGT":68590, "GGGGC":5056, "GGGGG":59131 }, "overrepresented_sequences": { } }, "command": "fastp -i /data/MicrobiomaFrangos/input/JCFS1_R1.fastq -I /data/MicrobiomaFrangos/input/JCFS1_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/JCFS1_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/JCFS1_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.html --json /data/MicrobiomaFrangos/output/fastp/JCFS1_R1.json " }