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"total_bases": 48289811, "q20_bases": 45090632, "q30_bases": 37730558, "total_cycles": 301, "quality_curves": { 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"CGCCG":8221, "CGCGA":813, "CGCGT":2730, "CGCGC":4499, "CGCGG":131674, "CGGAA":3002, "CGGAT":8207, "CGGAC":131098, "CGGAG":11580, "CGGTA":10894, "CGGTT":154634, "CGGTC":4868, "CGGTG":2167, "CGGCA":3430, "CGGCT":135873, "CGGCC":6113, "CGGCG":8213, "CGGGA":2339, "CGGGT":60180, "CGGGC":5856, "CGGGG":40593, "GAAAA":128010, "GAAAT":1012, "GAAAC":8711, "GAAAG":1180, "GAATA":1439, "GAATT":24836, "GAATC":579, "GAATG":236, "GAACA":2223, "GAACT":1022, "GAACC":3199, "GAACG":1544, "GAAGA":1093, "GAAGT":2279, "GAAGC":958, "GAAGG":5290, "GATAA":6389, "GATAT":1313, "GATAC":1033, "GATAG":1719, "GATTA":9420, "GATTT":10610, "GATTC":1899, "GATTG":850, "GATCA":762, "GATCT":9353, "GATCC":2238, "GATCG":802, "GATGA":415, "GATGT":782, "GATGC":137835, "GATGG":4491, "GACAA":129925, "GACAT":2423, "GACAC":2630, "GACAG":5160, "GACTA":158488, "GACTT":146153, "GACTC":10706, "GACTG":1255, "GACCA":142725, "GACCT":4946, "GACCC":9616, "GACCG":2021, "GACGA":1670, "GACGT":4275, "GACGC":1704, "GACGG":1872, "GAGAA":1196, "GAGAT":802, "GAGAC":10699, "GAGAG":138479, "GAGTA":1064, "GAGTT":146824, "GAGTC":1224, "GAGTG":2088, "GAGCA":850, "GAGCT":2261, "GAGCC":303848, "GAGCG":9878, "GAGGA":232, "GAGGT":895, "GAGGC":3236, "GAGGG":123965, "GTAAA":3755, "GTAAT":11720, "GTAAC":1060, "GTAAG":3856, "GTATA":2319, "GTATT":148342, "GTATC":167307, "GTATG":701, "GTACA":944, "GTACT":4650, "GTACC":1995, "GTACG":1451, "GTAGA":1453, "GTAGT":118217, "GTAGC":2907, "GTAGG":2148, "GTTAA":131554, "GTTAT":3740, "GTTAC":18844, "GTTAG":128181, "GTTTA":5377, "GTTTT":6209, "GTTTC":147854, "GTTTG":29572, "GTTCA":4729, "GTTCT":135936, "GTTCC":281679, "GTTCG":136997, "GTTGA":22943, "GTTGT":2858, "GTTGC":143562, "GTTGG":2337, "GTCAA":1408, "GTCAT":514, "GTCAC":1243, "GTCAG":157319, "GTCTA":2042, "GTCTT":14179, "GTCTC":10124, "GTCTG":1203, "GTCCA":13451, "GTCCT":4474, "GTCCC":2622, "GTCCG":1513, "GTCGA":462, "GTCGT":5227, "GTCGC":8525, "GTCGG":1513, "GTGAA":86, "GTGAT":449, "GTGAC":513, "GTGAG":940, "GTGTA":400, "GTGTT":147485, "GTGTC":2634, "GTGTG":320, "GTGCA":1026, "GTGCT":9252, "GTGCC":4347, "GTGCG":8633, "GTGGA":867, "GTGGT":2293, "GTGGC":9787, "GTGGG":1928, "GCAAA":862, "GCAAT":4832, "GCAAC":5561, "GCAAG":2410, "GCATA":1255, "GCATT":156118, "GCATC":2869, "GCATG":2650, "GCACA":3949, "GCACT":149256, "GCACC":27145, "GCACG":126491, "GCAGA":134322, "GCAGT":135616, "GCAGC":3193, "GCAGG":5721, "GCTAA":1070, "GCTAT":1876, "GCTAC":290259, "GCTAG":3541, "GCTTA":4566, "GCTTT":437342, "GCTTC":7424, "GCTTG":144451, "GCTCA":1362, "GCTCT":4793, "GCTCC":30403, "GCTCG":133175, "GCTGA":1603, "GCTGT":1869, "GCTGC":132858, "GCTGG":142870, "GCCAA":5779, "GCCAT":1543, "GCCAC":288216, "GCCAG":12649, "GCCTA":5497, "GCCTT":160574, "GCCTC":153387, "GCCTG":146265, "GCCCA":144961, "GCCCT":6246, "GCCCC":12816, "GCCCG":20757, "GCCGA":128045, "GCCGT":4317, "GCCGC":162412, "GCCGG":11577, "GCGAA":372, "GCGAT":797, "GCGAC":2415, "GCGAG":1485, "GCGTA":1244, "GCGTT":3184, "GCGTC":154588, "GCGTG":9325, "GCGCA":2414, "GCGCT":137895, "GCGCC":5899, "GCGCG":2886, "GCGGA":2635, "GCGGT":5396, "GCGGC":128049, "GCGGG":12148, "GGAAA":3660, "GGAAT":22131, "GGAAC":1348, "GGAAG":308, "GGATA":5687, "GGATT":11148, "GGATC":393, "GGATG":1181, "GGACA":129044, "GGACT":4403, "GGACC":2140, "GGACG":4316, "GGAGA":1496, "GGAGT":145494, "GGAGC":1616, "GGAGG":1359, "GGTAA":1058, "GGTAT":167192, "GGTAC":1411, "GGTAG":3966, "GGTTA":131067, "GGTTT":11628, "GGTTC":2467, "GGTTG":30521, "GGTCA":1309, "GGTCT":977, "GGTCC":766, "GGTCG":4534, "GGTGA":430, "GGTGT":147211, "GGTGC":8508, "GGTGG":11469, "GGCAA":2610, "GGCAT":1390, "GGCAC":131408, "GGCAG":5120, "GGCTA":1974, "GGCTT":143581, "GGCTC":7381, "GGCTG":134749, "GGCCA":5128, "GGCCT":2936, "GGCCC":10150, "GGCCG":12706, "GGCGA":1397, "GGCGT":2474, "GGCGC":2781, "GGCGG":7955, "GGGAA":999, "GGGAT":9582, "GGGAC":4764, "GGGAG":1583, "GGGTA":157716, "GGGTT":9185, "GGGTC":1127, "GGGTG":8968, "GGGCA":1602, "GGGCT":140565, "GGGCC":11408, "GGGCG":1559, "GGGGA":8864, "GGGGT":60737, "GGGGC":21594, "GGGGG":76332 }, "overrepresented_sequences": { } }, "command": "fastp -i /data/MicrobiomaFrangos/input/IPFS1_R1.fastq -I /data/MicrobiomaFrangos/input/IPFS1_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/IPFS1_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/IPFS1_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/IPFS1_R1.html --json /data/MicrobiomaFrangos/output/fastp/IPFS1_R1.json " }