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"total_cycles": 301, "quality_curves": { 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"CGGTC":2986, "CGGTG":2206, "CGGCA":6627, "CGGCT":74658, "CGGCC":3429, "CGGCG":2831, "CGGGA":12290, "CGGGT":33697, "CGGGC":7559, "CGGGG":20575, "GAAAA":22757, "GAAAT":1552, "GAAAC":1603, "GAAAG":5029, "GAATA":1636, "GAATT":37587, "GAATC":1237, "GAATG":1344, "GAACA":2757, "GAACT":3362, "GAACC":17583, "GAACG":1814, "GAAGA":3139, "GAAGT":3915, "GAAGC":617, "GAAGG":23860, "GATAA":29485, "GATAT":8750, "GATAC":7552, "GATAG":2835, "GATTA":3463, "GATTT":8454, "GATTC":1424, "GATTG":1378, "GATCA":1140, "GATCT":4141, "GATCC":2246, "GATCG":1312, "GATGA":319, "GATGT":2150, "GATGC":43901, "GATGG":1968, "GACAA":49920, "GACAT":736, "GACAC":1795, "GACAG":8744, "GACTA":80824, "GACTT":57875, "GACTC":2459, "GACTG":1518, "GACCA":44633, "GACCT":14500, "GACCC":1946, "GACCG":2405, "GACGA":387, "GACGT":2540, "GACGC":707, "GACGG":832, "GAGAA":899, "GAGAT":741, "GAGAC":1663, "GAGAG":42572, "GAGTA":789, "GAGTT":46281, "GAGTC":610, "GAGTG":1345, "GAGCA":6800, "GAGCT":2414, "GAGCC":141970, "GAGCG":2074, "GAGGA":389, "GAGGT":1347, "GAGGC":1702, "GAGGG":21222, "GTAAA":17105, "GTAAT":14377, "GTAAC":885, "GTAAG":11648, "GTATA":2458, "GTATT":80037, "GTATC":83596, "GTATG":622, "GTACA":1136, "GTACT":5406, "GTACC":810, "GTACG":766, "GTAGA":997, "GTAGT":69937, "GTAGC":2584, "GTAGG":8624, "GTTAA":39456, "GTTAT":2248, "GTTAC":16593, "GTTAG":71235, "GTTTA":5051, "GTTTT":26673, "GTTTC":65486, "GTTTG":40049, "GTTCA":24684, "GTTCT":47513, "GTTCC":99843, "GTTCG":44607, "GTTGA":43918, "GTTGT":2781, "GTTGC":52297, "GTTGG":8431, "GTCAA":1345, "GTCAT":2525, "GTCAC":2377, "GTCAG":79547, "GTCTA":15000, "GTCTT":4600, "GTCTC":2120, "GTCTG":2037, "GTCCA":23177, "GTCCT":7198, "GTCCC":10424, "GTCCG":1621, "GTCGA":400, "GTCGT":3337, "GTCGC":10999, "GTCGG":553, "GTGAA":783, "GTGAT":986, "GTGAC":6610, "GTGAG":407, "GTGTA":327, "GTGTT":78296, "GTGTC":3935, "GTGTG":218, "GTGCA":1169, "GTGCT":3287, "GTGCC":17476, "GTGCG":1032, "GTGGA":950, "GTGGT":1945, "GTGGC":6158, "GTGGG":1577, "GCAAA":2071, "GCAAT":21557, "GCAAC":7918, "GCAAG":5113, "GCATA":7416, "GCATT":81508, "GCATC":2204, "GCATG":1659, "GCACA":2867, "GCACT":83307, "GCACC":19281, "GCACG":70595, "GCAGA":44443, "GCAGT":50862, "GCAGC":3966, "GCAGG":10559, "GCTAA":2252, "GCTAT":3205, "GCTAC":134928, "GCTAG":1699, "GCTTA":11073, "GCTTT":162097, "GCTTC":5492, "GCTTG":64781, "GCTCA":1241, "GCTCT":4278, "GCTCC":56490, "GCTCG":36583, "GCTGA":812, "GCTGT":3908, "GCTGC":74017, "GCTGG":77851, "GCCAA":3975, "GCCAT":1989, "GCCAC":127799, "GCCAG":3689, "GCCTA":22409, "GCCTT":83232, "GCCTC":89483, "GCCTG":57032, "GCCCA":71315, "GCCCT":14322, "GCCCC":24983, "GCCCG":14967, "GCCGA":46446, "GCCGT":5781, "GCCGC":77861, "GCCGG":2702, "GCGAA":434, "GCGAT":734, "GCGAC":1629, "GCGAG":330, "GCGTA":564, "GCGTT":1145, "GCGTC":62753, "GCGTG":964, "GCGCA":879, "GCGCT":33753, "GCGCC":8189, "GCGCG":1824, "GCGGA":954, "GCGGT":2923, "GCGGC":73231, "GCGGG":3748, "GGAAA":1105, "GGAAT":36647, "GGAAC":646, "GGAAG":423, "GGATA":26314, "GGATT":6097, "GGATC":1203, "GGATG":999, "GGACA":49943, "GGACT":2523, "GGACC":1033, "GGACG":2369, "GGAGA":809, "GGAGT":45505, "GGAGC":645, "GGAGG":948, "GGTAA":1041, "GGTAT":82205, "GGTAC":1186, "GGTAG":3052, "GGTTA":31699, "GGTTT":14015, "GGTTC":767, "GGTTG":43236, "GGTCA":1343, "GGTCT":2460, "GGTCC":1685, "GGTCG":1773, "GGTGA":369, "GGTGT":77883, "GGTGC":9494, "GGTGG":7108, "GGCAA":952, "GGCAT":675, "GGCAC":76767, "GGCAG":4945, "GGCTA":1904, "GGCTT":53019, "GGCTC":2057, "GGCTG":75348, "GGCCA":3943, "GGCCT":1542, "GGCCC":5268, "GGCCG":16011, "GGCGA":499, "GGCGT":706, "GGCGC":964, "GGCGG":3418, "GGGAA":11332, "GGGAT":4295, "GGGAC":2951, "GGGAG":952, "GGGTA":80941, "GGGTT":26923, "GGGTC":1252, "GGGTG":3386, "GGGCA":813, "GGGCT":29068, "GGGCC":2148, "GGGCG":688, "GGGGA":1045, "GGGGT":38456, "GGGGC":3124, "GGGGG":24591 }, "overrepresented_sequences": { } }, "command": "fastp -i /data/MicrobiomaFrangos/input/DPMS1_R1.fastq -I /data/MicrobiomaFrangos/input/DPMS1_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/DPMS1_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/DPMS1_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/DPMS1_R1.html --json /data/MicrobiomaFrangos/output/fastp/DPMS1_R1.json " }