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"GGGTT":49310, "GGGTC":4515, "GGGTG":234389, "GGGCA":120009, "GGGCT":140545, "GGGCC":7722, "GGGCG":149881, "GGGGA":268298, "GGGGT":1026, "GGGGC":151812, "GGGGG":264311 }, "overrepresented_sequences": { } }, "read2_after_filtering": { "total_reads": 165995, "total_bases": 49822853, "q20_bases": 49080731, "q30_bases": 46595170, "total_cycles": 301, "quality_curves": { 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"CGCTT":333970, "CGCTC":106229, "CGCTG":7933, "CGCCA":172436, "CGCCT":299813, "CGCCC":68977, "CGCCG":37228, "CGCGA":3403, "CGCGT":894, "CGCGC":43032, "CGCGG":171205, "CGGAA":16221, "CGGAT":95884, "CGGAC":35183, "CGGAG":29632, "CGGTA":31057, "CGGTT":18711, "CGGTC":2338, "CGGTG":20745, "CGGCA":21615, "CGGCT":173096, "CGGCC":10008, "CGGCG":355, "CGGGA":14152, "CGGGT":78033, "CGGGC":41431, "CGGGG":61791, "GAAAA":8893, "GAAAT":5719, "GAAAC":3899, "GAAAG":20919, "GAATA":3761, "GAATT":167127, "GAATC":823, "GAATG":1172, "GAACA":4151, "GAACT":12614, "GAACC":6319, "GAACG":4993, "GAAGA":1372, "GAAGT":6410, "GAAGC":215, "GAAGG":409, "GATAA":114804, "GATAT":5293, "GATAC":3471, "GATAG":15587, "GATTA":22858, "GATTT":54410, "GATTC":2142, "GATTG":9007, "GATCA":794, "GATCT":25924, "GATCC":1937, "GATCG":134, "GATGA":230, "GATGT":4285, "GATGC":20373, "GATGG":753, "GACAA":40048, "GACAT":1062, "GACAC":10599, "GACAG":13861, "GACTA":164802, "GACTT":120798, "GACTC":21338, "GACTG":3687, "GACCA":11690, "GACCT":2369, "GACCC":1598, "GACCG":10863, "GACGA":906, "GACGT":1031, "GACGC":420, "GACGG":297, "GAGAA":1077, "GAGAT":844, "GAGAC":18792, "GAGAG":4098, "GAGTA":290, "GAGTT":32204, "GAGTC":786, "GAGTG":8184, "GAGCA":13729, "GAGCT":3750, "GAGCC":179544, "GAGCG":19980, "GAGGA":210, "GAGGT":17871, "GAGGC":3446, "GAGGG":10467, "GTAAA":89187, "GTAAT":51688, "GTAAC":831, "GTAAG":65252, "GTATA":7314, "GTATT":195617, "GTATC":182824, "GTATG":2555, "GTACA":981, "GTACT":25990, "GTACC":6174, "GTACG":853, "GTAGA":540, "GTAGT":148584, "GTAGC":7358, "GTAGG":9920, "GTTAA":83195, "GTTAT":11197, "GTTAC":88142, "GTTAG":161498, "GTTTA":4931, "GTTTT":67840, "GTTTC":115848, "GTTTG":162435, "GTTCA":8232, "GTTCT":29061, "GTTCC":169717, "GTTCG":10203, "GTTGA":107092, "GTTGT":2833, "GTTGC":30607, "GTTGG":7111, "GTCAA":655, "GTCAT":12414, "GTCAC":915, "GTCAG":164804, "GTCTA":63914, "GTCTT":26264, "GTCTC":9095, "GTCTG":11074, "GTCCA":136596, "GTCCT":2197, "GTCCC":44896, "GTCCG":4320, "GTCGA":269, "GTCGT":3244, "GTCGC":24356, "GTCGG":542, "GTGAA":300, "GTGAT":1258, "GTGAC":1224, "GTGAG":1016, "GTGTA":363, "GTGTT":153111, "GTGTC":16241, "GTGTG":237, "GTGCA":1077, "GTGCT":8228, "GTGCC":39650, "GTGCG":19396, "GTGGA":395, "GTGGT":7446, "GTGGC":3058, "GTGGG":1870, "GCAAA":7296, "GCAAT":38767, "GCAAC":5708, "GCAAG":14703, "GCATA":1374, "GCATT":167372, "GCATC":16051, "GCATG":14654, "GCACA":3986, "GCACT":86662, "GCACC":91262, "GCACG":168491, "GCAGA":14641, "GCAGT":138977, "GCAGC":4390, "GCAGG":25886, "GCTAA":4760, "GCTAT":12362, "GCTAC":195942, "GCTAG":3952, "GCTTA":53846, "GCTTT":221178, "GCTTC":15346, "GCTTG":176010, "GCTCA":2423, "GCTCT":5022, "GCTCC":241306, "GCTCG":20728, "GCTGA":4264, "GCTGT":11881, "GCTGC":186294, "GCTGG":164102, "GCCAA":21167, "GCCAT":4867, "GCCAC":213832, "GCCAG":32357, "GCCTA":59920, "GCCTT":184576, "GCCTC":195739, "GCCTG":42419, "GCCCA":93683, "GCCCT":34750, "GCCCC":110580, "GCCCG":50959, "GCCGA":23918, "GCCGT":54110, "GCCGC":147705, "GCCGG":13811, "GCGAA":2737, "GCGAT":1183, "GCGAC":2416, "GCGAG":102, "GCGTA":613, "GCGTT":881, "GCGTC":76087, "GCGTG":19333, "GCGCA":1248, "GCGCT":26156, "GCGCC":46283, "GCGCG":2147, "GCGGA":721, "GCGGT":11437, "GCGGC":163865, "GCGGG":632, "GGAAA":269, "GGAAT":166938, "GGAAC":548, "GGAAG":2791, "GGATA":104990, "GGATT":34630, "GGATC":423, "GGATG":964, "GGACA":37906, "GGACT":979, "GGACC":448, "GGACG":135, "GGAGA":222, "GGAGT":29401, "GGAGC":145, "GGAGG":8986, "GGTAA":729, "GGTAT":192614, "GGTAC":8395, "GGTAG":4121, "GGTTA":44226, "GGTTT":27396, "GGTTC":528, "GGTTG":85116, "GGTCA":384, "GGTCT":1830, "GGTCC":2212, "GGTCG":2100, "GGTGA":71, "GGTGT":153030, "GGTGC":3791, "GGTGG":313, "GGCAA":2541, "GGCAT":1407, "GGCAC":181678, "GGCAG":22048, "GGCTA":5747, "GGCTT":55769, "GGCTC":1812, "GGCTG":172154, "GGCCA":13726, "GGCCT":571, "GGCCC":14653, "GGCCG":43602, "GGCGA":2692, "GGCGT":658, "GGCGC":451, "GGCGG":3677, "GGGAA":14418, "GGGAT":33495, "GGGAC":794, "GGGAG":581, "GGGTA":171756, "GGGTT":67852, "GGGTC":1552, "GGGTG":347, "GGGCA":1090, "GGGCT":43002, "GGGCC":20313, "GGGCG":139, "GGGGA":19751, "GGGGT":82699, "GGGGC":19862, "GGGGG":65502 }, "overrepresented_sequences": { } }, "command": "fastp -i /data/MicrobiomaFrangos/input/CAMS2_R1.fastq -I /data/MicrobiomaFrangos/input/CAMS2_R2.fastq -o /data/MicrobiomaFrangos/output/fastp/CAMS2_cleaned_R1.fastq -O /data/MicrobiomaFrangos/output/fastp/CAMS2_cleaned_R2.fastq --disable_adapter_trimming --average_qual 10 --cut_right --cut_right_window_size 5 --cut_right_mean_quality 10 --html /data/MicrobiomaFrangos/output/fastp/CAMS2_R1.html --json /data/MicrobiomaFrangos/output/fastp/CAMS2_R1.json " }